RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 RAB41Q5JT25 222 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 PIK3R6Q5UE93 754 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 EPM2AIP1Q7L775 607 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 C14orf80Q86SX3 495 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 SLC22A18ASQ8N1D0 253 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF548Q8NEK5 533 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 HTR3CQ8WXA8 447 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 LIN37Q96GY3 246 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 PRICKLE1Q96MT3 831 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 DUSP16Q9BY84 665 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 ADNPQ9H2P0 1102 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 CCDC39Q9UFE4 941 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 ICE1Q9Y2F5 2266 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 EME2A4GXA9 379 aaPredicted RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 LRRIQ3A6PVS8 624 aaPredicted RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 PLD2O14939 933 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 TBL1XO60907 577 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 ASS1P00966 412 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 IL1BP01584 269 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 C4BPAP04003 597 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 SRPRAP08240 638 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 LIPCP11150 499 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 WT1P19544 449 aaPredicted RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 SLC5A2P31639 672 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 CTSOP43234 321 aaPredicted RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 SNRPFP62306 86 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 EIF3IQ13347 325 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 MORC3Q14149 939 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 SKIDA1Q1XH10 827 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 RRAGBQ5VZM2 374 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 RFWD3Q6PCD5 774 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 CCDC65Q8IXS2 484 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 OR13H1Q8NG92 308 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 FIBINQ8TAL6 211 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 SPAG5Q96R06 1193 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 NT5C1AQ9BXI3 368 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 GPR27Q9NS67 375 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 OLA1Q9NTK5 396 aaKnown RBP10.74□□□□□ -0.69
TRAV33-201ENST00000557514 ERVW-1Q9UQF0 538 aa10.74□□□□□ -0.69
TRAV33-201ENST00000557514 CPED1A4D0V7 1026 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 CASC3O15234 703 aaKnown RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 CLIC2O15247 247 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 IRAK2O43187 625 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 KIF20AO95235 890 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 IGLV3-27P01718 113 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 NME1P15531 152 aaKnown RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PRLRP16471 622 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 SLC6A4P31645 630 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 HNRNPKP61978 463 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 SGSM1Q2NKQ1 1148 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 ZACNQ401N2 412 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PITRM1Q5JRX3 1037 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PPP1R26Q5T8A7 1209 aaPredicted RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PM20D1Q6GTS8 502 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 SPOPLQ6IQ16 392 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 CRTC1Q6UUV9 634 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 GCNT7Q6ZNI0 430 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 ABI3BPQ7Z7G0 1075 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PIGZQ86VD9 579 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PTRH1Q86Y79 214 aaKnown RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 C12orf56Q8IXR9 622 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 HJURPQ8NCD3 748 aaPredicted RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 WDR48Q8TAF3 677 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PARD3BQ8TEW8 1205 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 TAF4BQ92750 862 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 NOX5Q96PH1 765 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 MYOCQ99972 504 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 CALN1Q9BXU9 219 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 LRRC4CQ9HCJ2 640 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 WDR70Q9NW82 654 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 PLEKHB1Q9UF11 243 aaPredicted RBP10.73□□□□□ -0.69
TRAV33-201ENST00000557514 SLCO3A1Q9UIG8 710 aa10.73□□□□□ -0.69
TRAV33-201ENST00000557514 OTOGQ6ZRI0 2925 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 RPN1P04843 607 aaKnown RBP10.72□□□□□ -0.69
TRAV33-201ENST00000557514 VAV1P15498 845 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 TXLNAP40222 546 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 TAS2R38P59533 333 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 CYP4F2P78329 520 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 ECT2LQ008S8 904 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 CNTN1Q12860 1018 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 CDH18Q13634 790 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
TRAV33-201ENST00000557514 NR0B2Q15466 257 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 FSCBQ5H9T9 825 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 PERM1Q5SV97 790 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 VASH2Q86V25 355 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF507Q8TCN5 953 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 MYEOVQ96EZ4 313 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 UBXN6Q9BZV1 441 aa10.72□□□□□ -0.69
TRAV33-201ENST00000557514 DNAJC28Q9NX36 388 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms