RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 OR1E1P30953 314 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 P2RY2P41231 377 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 IRAK1P51617 712 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 KRT83P78385 493 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 CAMK2GQ13555 558 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 ACAP1Q15027 740 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 ELF2Q15723 593 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 ALFQ53S48 1182 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 CCDC185Q8N715 623 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 OR2T3Q8NH03 318 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-209ENST00000557342 MRGPRX1Q96LB2 322 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 FEM1AQ9BSK4 669 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 MUC3BQ9H195 1237 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 PRDM16Q9HAZ2 1276 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 MPP6Q9NZW5 540 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 SLC25A13Q9UJS0 675 aa12.84□□□□□ -0.35
SLIRP-209ENST00000557342 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.35
SLIRP-209ENST00000557342 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 AKR1B15C9JRZ8 316 aaPredicted RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 RETP07949 1114 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 HLA-EP13747 358 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 L1CAMP32004 1257 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 ADKP55263 362 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 OGDHQ02218 1023 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 SLC18A3Q16572 532 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 LPAL2Q16609 132 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 PLK5Q496M5 336 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 MANEALQ5VSG8 457 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 KIAA1324Q6UXG2 1013 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 SLC36A4Q6YBV0 504 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 KBTBD6Q86V97 674 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 TMPRSS6Q8IU80 811 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 ALG14Q96F25 216 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 SIPA1Q96FS4 1042 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 MYO19Q96H55 970 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 MRGPRX3Q96LB0 322 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
SLIRP-209ENST00000557342 THAP2Q9H0W7 228 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 FZD10Q9ULW2 581 aa12.83□□□□□ -0.36
SLIRP-209ENST00000557342 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 ILVBLA1L0T0 632 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 DCLK1O15075 740 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 MAP3K13O43283 966 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 AP5Z1O43299 807 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 AKR1B10O60218 316 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 LRP3O75074 770 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 LRIG2O94898 1065 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 CYP1A2P05177 515 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 ACADMP11310 421 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 RHOQP17081 205 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 HTR7P34969 479 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 ETFBP38117 255 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 MAPKAPK2P49137 400 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 COPAP53621 1224 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 HNRNPA1L2Q32P51 320 aaKnown RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 MAP7D1Q3KQU3 841 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 SPDYCQ5MJ68 293 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 RWDD4Q6NW29 188 aaKnown RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 ERLEC1Q96DZ1 483 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 MRFAP1L1Q96HT8 127 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 EPAS1Q99814 870 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 C2orf49Q9BVC5 232 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-209ENST00000557342 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 DONSONQ9NYP3 566 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 IP6K2Q9UHH9 426 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 NENFQ9UMX5 172 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 INVSQ9Y283 1065 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 OR51B4Q9Y5P0 310 aa12.82□□□□□ -0.36
SLIRP-209ENST00000557342 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 RNASEH1O60930 286 aaKnown RBP12.81□□□□□ -0.36
SLIRP-209ENST00000557342 EPN2O95208 641 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 H2AFZP0C0S5 128 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 C7P10643 843 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 OXTRP30559 389 aa12.81□□□□□ -0.36
SLIRP-209ENST00000557342 CTSOP43234 321 aaPredicted RBP12.81□□□□□ -0.36
SLIRP-209ENST00000557342 ZNF75DP51815 510 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms