RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RXFP3Q9NSD7 469 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 HYPKQ9NX55 129 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 MGAT4CQ9UBM8 478 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 LRRFIP2Q9Y608 721 aaKnown RBP4.4□□□□□ -1.71
CHD8-212ENST00000557329 LRRC37AA6NMS7 1700 aa4.4□□□□□ -1.71
CHD8-212ENST00000557329 DDX60LQ5H9U9 1706 aaKnown RBP4.39□□□□□ -1.71
CHD8-212ENST00000557329 ANKRD18BA2A2Z9 1011 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 PRRT4C9JH25 899 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 TMEM232C9JQI7 657 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 H7C4K7 107 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 CXCL11O14625 94 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 DDX58O95786 925 aaKnown RBP4.39□□□□□ -1.71
CHD8-212ENST00000557329 MT-CO3P00414 261 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 RBL1P28749 1068 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 GYG1P46976 350 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 COPAP53621 1224 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 COBLL1Q53SF7 1204 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 TLDC1Q6P9B6 456 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 KIRREL2Q6UWL6 708 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 ZDHHC24Q6UX98 284 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 NAPRTQ6XQN6 538 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 VGLL2Q8N8G2 317 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 PNPLA1Q8N8W4 532 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 CCDC191Q8NCU4 936 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 MBD3L2Q8NHZ7 208 aaPredicted RBP4.39□□□□□ -1.71
CHD8-212ENST00000557329 CYP2W1Q8TAV3 490 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 TMEM171Q8WVE6 324 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 TRIB2Q92519 343 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 PMM1Q92871 262 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 TEKT1Q969V4 418 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 PRR25Q96S07 402 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 CINPQ9BW66 212 aaPredicted RBP4.39□□□□□ -1.71
CHD8-212ENST00000557329 MAGEB5Q9BZ81 275 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 CIPCQ9C0C6 399 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 PNNQ9H307 717 aaKnown RBP4.39□□□□□ -1.71
CHD8-212ENST00000557329 MGAMO43451 1857 aa4.39□□□□□ -1.71
CHD8-212ENST00000557329 SPEF2Q9C093 1822 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 KBTBD13C9JR72 458 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 H3BNC9 293 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 AP4M1O00189 453 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PPP6CO00743 305 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 COQ9O75208 318 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 GCATO75600 419 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 LATS1O95835 1130 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 MYL1P05976 194 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 CELA2AP08217 269 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 NBPF7P0C2Y1 421 aaPredicted RBP4.38□□□□□ -1.71
CHD8-212ENST00000557329 IL1R1P14778 569 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 ZNF37AP17032 561 aaPredicted RBP4.38□□□□□ -1.71
CHD8-212ENST00000557329 ADRA1DP25100 572 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 SLC5A2P31639 672 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PROK1P58294 105 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 CYP4F2P78329 520 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 TXNL4AP83876 142 aaKnown RBP4.38□□□□□ -1.71
CHD8-212ENST00000557329 SP2Q02086 613 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 BTKQ06187 659 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 STK3Q13188 491 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 CCL14Q16627 93 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD8-212ENST00000557329 CYP1B1Q16678 543 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PTCHD3Q3KNS1 767 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 MFSD14CQ5VZR4 134 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 ZKSCAN2Q63HK3 967 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 ANO7Q6IWH7 933 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 MRNIPQ6NTE8 343 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 SLC39A5Q6ZMH5 540 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 ZNF813Q6ZN06 617 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PJA1Q8NG27 643 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 LENG8Q96PV6 779 aaPredicted RBP4.38□□□□□ -1.71
CHD8-212ENST00000557329 FAM118BQ9BPY3 351 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PAGR1Q9BTK6 254 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 SLC28A3Q9HAS3 691 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PI4KBQ9UBF8 816 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 SERGEFQ9UGK8 458 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PCDHGB6Q9Y5F9 930 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 LAMA2P24043 3122 aaKnown RBP4.38□□□□□ -1.71
CHD8-212ENST00000557329 OTOFQ9HC10 1997 aa4.38□□□□□ -1.71
CHD8-212ENST00000557329 PSME4Q14997 1843 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 HNRNPDLO14979 420 aaKnown RBP4.37□□□□□ -1.71
CHD8-212ENST00000557329 PRC1O43663 620 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 EXOC3O60645 756 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 IRX3P78415 501 aaPredicted RBP4.37□□□□□ -1.71
CHD8-212ENST00000557329 CFHR3Q02985 330 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 ZNF543Q08ER8 600 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 PICALMQ13492 652 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 FAM187BQ17R55 369 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 LY6KQ17RY6 165 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 MORN5Q5VZ52 161 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 LDHAL6AQ6ZMR3 332 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 NEK8Q86SG6 692 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 GALNT16Q8N428 558 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 C12orf76Q8N812 135 aaPredicted RBP4.37□□□□□ -1.71
CHD8-212ENST00000557329 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
CHD8-212ENST00000557329 CTHRC1Q96CG8 243 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 HS6ST2Q96MM7 605 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 SLC25A32Q9H2D1 315 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms