RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PLD1Q13393 1074 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GRTP1Q5TC63 336 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 EYA1Q99502 592 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NOL11Q9H8H0 719 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 TCP10L2B9ZVM9 353 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 MTHFD1P11586 935 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF549Q6P9A3 640 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FNDC5Q8NAU1 212 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TEX47Q8TBZ9 253 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 CHKBQ9Y259 395 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 HSD17B3P37058 310 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 DPYSQ14117 519 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 STK32CQ86UX6 486 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TAS2R13Q9NYV9 303 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SERPINB7O75635 380 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM253P0C7T8 217 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ZSCAN18Q8TBC5 510 aaPredicted RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 MKL1Q969V6 931 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SPEF1Q9Y4P9 236 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 MAP3K19Q56UN5 1328 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TBX3O15119 743 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 RPS2P15880 293 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FAM98CQ17RN3 349 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 XKRXQ6PP77 449 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 GATAD2AQ86YP4 633 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TESCQ96BS2 214 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 VANGL2Q9ULK5 521 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SLC12A4Q9UP95 1085 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 A0A087X1B8 175 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 NPTX2P47972 431 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 A1CFQ9NQ94 594 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ERI2A8K979 691 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 PRMT5O14744 637 aaPredicted RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 KRT36O76013 467 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 MTDHQ86UE4 582 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SPATA33Q96N06 139 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.98□□□□□ -0.971e-7■■■□□ 18.9
SYNE3-205ENST00000557275 ESPL1Q14674 2120 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 PTGES3LE9PB15 166 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 H3BQF6 201 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 DNAJA2O60884 412 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 NUDT14O95848 222 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 AGKQ53H12 422 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 OTUD3Q5T2D3 398 aaPredicted RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 CYP20A1Q6UW02 462 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FAM196AQ6ZSG2 479 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 APOBEC3FQ8IUX4 373 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 IQCF2Q8IXL9 164 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 C1orf131Q8NDD1 294 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 OTUD7AQ8TE49 926 aaPredicted RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 OSBP2Q969R2 916 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 PCDHB6Q9Y5E3 794 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 KIAA0100Q14667 2235 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FCER1AP12319 257 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ETS1P14921 441 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 UCHL3P15374 230 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ABRQ12979 859 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ADSSL1Q8N142 457 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 CD101Q93033 1021 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF285Q96NJ3 590 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TRPV5Q9NQA5 729 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ARHGEF4Q9NR80 690 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FAM49BQ9NUQ9 324 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 GTF3C4Q9UKN8 822 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 DNPEPQ9ULA0 475 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 EYA4O95677 639 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 RAG1P15918 1043 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 RIPOR1Q6ZS17 1223 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 DSG4Q86SJ6 1040 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 EIF1ADQ8N9N8 165 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 UNKQ9C0B0 810 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 CCSER1Q9C0I3 900 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 FAM240BA0A1B0GVZ2 78 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TCEA3O75764 348 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SRGNP10124 158 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SNRNP35Q16560 246 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 SLC9A4Q6AI14 798 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 AAGABQ6PD74 315 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 ASXL2Q76L83 1435 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 HPS6Q86YV9 775 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 CMTR2Q8IYT2 770 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 LEMD2Q8NC56 503 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 TPD52L3Q96J77 140 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 IKZF3Q9UKT9 509 aa8.98□□□□□ -0.97
SYNE3-205ENST00000557275 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
SYNE3-205ENST00000557275 PLEKHA8P1O95397 391 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CYP2E1P05181 493 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CES1P23141 567 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 OXNAD1Q96HP4 312 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 A0A1B0GVC2 190 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MYL3P08590 195 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 GZMAP12544 262 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PRKCEQ02156 737 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RASGEF1BQ0VAM2 473 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HELQQ8TDG4 1101 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms