RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ZNF276Q8N554 614 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-220ENST00000557037 JPH3Q8WXH2 748 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-220ENST00000557037 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 CDK5RAP1Q96SZ6 601 aaKnown RBP12.98□□□□□ -0.33
PSEN1-220ENST00000557037 CLIC5Q9NZA1 410 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 SDK2Q58EX2 2172 aa12.98□□□□□ -0.33
PSEN1-220ENST00000557037 PRAMEF33A0A0G2JMD5 474 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 EDDM13A0A1B0GTR0 161 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 PRAMEF10O60809 474 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 TBL1XO60907 577 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 KRT7P08729 469 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 MZF1P28698 734 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 CD97P48960 835 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 MLLT10P55197 1068 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 CLDN2P57739 230 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 CCDC186Q7Z3E2 898 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 TRIM69Q86WT6 500 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 TMEM145Q8NBT3 493 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 C9orf43Q8TAL5 461 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
PSEN1-220ENST00000557037 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 SLC12A9Q9BXP2 914 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 STIM2Q9P246 746 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 ESPL1Q14674 2120 aa12.97□□□□□ -0.33
PSEN1-220ENST00000557037 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 NVLO15381 856 aaKnown RBP12.96□□□□□ -0.33
PSEN1-220ENST00000557037 PLRG1O43660 514 aaKnown RBP12.96□□□□□ -0.33
PSEN1-220ENST00000557037 PHACTR2O75167 634 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 JMJD7P0C870 316 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 VAV1P15498 845 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 GNLYP22749 145 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 NDST1P52848 882 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 OXCT1P55809 520 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 TRIP4Q15650 581 aaPredicted RBP12.96□□□□□ -0.33
PSEN1-220ENST00000557037 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 RFWD3Q6PCD5 774 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 SYAP1Q96A49 352 aaPredicted RBP12.96□□□□□ -0.33
PSEN1-220ENST00000557037 PPP1R13BQ96KQ4 1090 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 PREBQ9HCU5 417 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 NCKIPSDQ9NZQ3 722 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
PSEN1-220ENST00000557037 INTS6Q9UL03 887 aaKnown RBP12.96□□□□□ -0.33
PSEN1-220ENST00000557037 PRRC2CQ9Y520 2896 aaKnown RBP12.96□□□□□ -0.34
PSEN1-220ENST00000557037 HIVEP1P15822 2718 aa12.96□□□□□ -0.34
PSEN1-220ENST00000557037 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 SLC26A4O43511 780 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
PSEN1-220ENST00000557037 SEMA7AO75326 666 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ASLP04424 464 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 GAP43P17677 238 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ITIH1P19827 911 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ATICP31939 592 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.34
PSEN1-220ENST00000557037 CNTN1Q12860 1018 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 BMT2Q1RMZ1 405 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
PSEN1-220ENST00000557037 UNC13CQ8NB66 2214 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 SCN8AQ9UQD0 1980 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 KIAA0391O15091 583 aaKnown RBP12.94□□□□□ -0.34
PSEN1-220ENST00000557037 NUMBP49757 651 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 EIF3IQ13347 325 aaKnown RBP12.94□□□□□ -0.34
PSEN1-220ENST00000557037 Q6ZSR6 202 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 PTAR1Q7Z6K3 402 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-220ENST00000557037 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 SLC35F3Q8IY50 421 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 LMX1AQ8TE12 382 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
PSEN1-220ENST00000557037 AK8Q96MA6 479 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
PSEN1-220ENST00000557037 SARDHQ9UL12 918 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms