RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GARSP41250 739 aaKnown RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 MS4A2Q01362 244 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 CCDC153Q494R4 210 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 DSELQ8IZU8 1212 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 METTL25Q8N6Q8 603 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 DRAXINQ8NBI3 349 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 HIC2Q96JB3 615 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 C11orf84Q9BUA3 381 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 USP3Q9Y6I4 520 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 SOCS7O14512 581 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 PEX1O43933 1283 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 CRTAMO95727 393 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 CLPTM1O96005 669 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 INSRRP14616 1297 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 PTPN9P43378 593 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 INHBCP55103 352 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 IFRD2Q12894 506 aaPredicted RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 FLOT2Q14254 428 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 PPP2R5DQ14738 602 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 EML3Q32P44 896 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 LSM12Q3MHD2 195 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 NADK2Q4G0N4 442 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 GLRA4Q5JXX5 417 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 C6orf52Q5T4I8 152 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 GRTP1Q5TC63 336 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 EXOC8Q8IYI6 725 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRP54-213ENST00000556994 PIP4K2CQ8TBX8 421 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 CENPIQ92674 756 aaPredicted RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 RCN3Q96D15 328 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 PRICKLE1Q96MT3 831 aaPredicted RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 BTBD9Q96Q07 612 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 RBBP8Q99708 897 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 CPNE1Q99829 537 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 APOL2Q9BQE5 337 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 NUF2Q9BZD4 464 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 PRDM12Q9H4Q4 367 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 DDX18Q9NVP1 670 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 TK2O00142 265 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 ATP9BO43861 1147 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 C22orf31O95567 290 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 GLDCP23378 1020 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 NXNQ6DKJ4 435 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 LILRA2Q8N149 483 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 DNAAF3Q8N9W5 541 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 FAM156AQ8NDB6 213 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 URGCPQ8TCY9 931 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 FAM149B1Q96BN6 582 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 DGCR14Q96DF8 476 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 ZMAT2Q96NC0 199 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 CATSPER2Q96P56 530 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
SRP54-213ENST00000556994 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 IRAK4Q9NWZ3 460 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 AP4B1Q9Y6B7 739 aa11.64□□□□□ -0.55
SRP54-213ENST00000556994 SMIM31A0A1B0GVY4 71 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 ZNF487B1APH4 448 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 HBP1O60381 514 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 TRIM13O60858 407 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 JUNP05412 331 aaKnown RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 C2P06681 752 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SRGAP2BP0DMP2 458 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 THRAP10827 490 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 TPH1P17752 444 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 LMO2P25791 158 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 PRDX6P30041 224 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SPRP35270 261 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 DPP6P42658 865 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 GLRBP48167 497 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 CEACAM7Q14002 265 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 CERCAMQ5T4B2 595 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 KLHDC10Q6PID8 442 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 DEFB106AQ8N104 65 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 MARVELD2Q8N4S9 558 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 KYQ8NBH2 561 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 BHLHE22Q8NFJ8 381 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 PRPF18Q99633 342 aaKnown RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 NMRAL1Q9HBL8 299 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 FZD10Q9ULW2 581 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 RGSL1A5PLK6 1076 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 HACD1B0YJ81 288 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 DENRO43583 198 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms