RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 EFHC2Q5JST6 749 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ARTNQ5T4W7 220 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 C6orf118Q5T5N4 469 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 RNF219Q5W0B1 726 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF783Q6ZMS7 281 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 PRR23BQ6ZRT6 265 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 C11orf74Q86VG3 221 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ALG14Q96F25 216 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ZC3H10Q96K80 434 aaKnown RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 MRGPRX3Q96LB0 322 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 CHP1Q99653 195 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 TPSD1Q9BZJ3 242 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 MPP6Q9NZW5 540 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 FZD10Q9ULW2 581 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 NENFQ9UMX5 172 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 OR51B4Q9Y5P0 310 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 PLXND1Q9Y4D7 1925 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 CKAP5Q14008 2032 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 AKR1B10O60218 316 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 LRIG2O94898 1065 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 RHOCP08134 193 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 RHOQP17081 205 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 P2RY2P41231 377 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 KRT83P78385 493 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF252P-AS1Q0IIN9 211 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 PIGHQ14442 188 aaPredicted RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 ERMARDQ5T6L9 678 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 MANEALQ5VSG8 457 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 RWDD4Q6NW29 188 aaKnown RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 METTL3Q86U44 580 aaKnown RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 TMPRSS6Q8IU80 811 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 PSTKQ8IV42 348 aaKnown RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 OR52K2Q8NGK3 314 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 MYO19Q96H55 970 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 MRGPRX1Q96LB2 322 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 MAGEB5Q9BZ81 275 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 MUC3BQ9H195 1237 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 FBRSQ9HAH7 460 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 PRDM16Q9HAZ2 1276 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 IP6K2Q9UHH9 426 aa10.98□□□□□ -0.65
LINC00239-201ENST00000556973 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
LINC00239-201ENST00000556973 CEP192Q8TEP8 1941 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 DMDP11532 3685 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 ILVBLA1L0T0 632 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 EIF3CLB5ME19 914 aaKnown RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 FAM72CH0Y354 149 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 MYO1FO00160 1098 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 DCLK1O15075 740 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 RHOBTB1O94844 696 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 H2AFZP0C0S5 128 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 C7P10643 843 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 HLA-EP13747 358 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 NDUFV2P19404 249 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 HTR7P34969 479 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 PCK1P35558 622 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 CTSOP43234 321 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 COPAP53621 1224 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 ELF2Q15723 593 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 FAM72AQ5TYM5 149 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 FAM72DQ6L9T8 149 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 SLC36A4Q6YBV0 504 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 H2AFVQ71UI9 128 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 TFAP2DQ7Z6R9 452 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 FAM72BQ86X60 149 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 OR2T3Q8NH03 318 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 CTNNBL1Q8WYA6 563 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 RUBCNQ92622 972 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 PRCCQ92733 491 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 TBC1D31Q96DN5 1066 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 RPL10LQ96L21 214 aaKnown RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 EIF3CQ99613 913 aaKnown RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 C2orf49Q9BVC5 232 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 NUP85Q9BW27 656 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 TRIM7Q9C029 511 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 DUSP15Q9H1R2 295 aaPredicted RBP10.97□□□□□ -0.65
LINC00239-201ENST00000556973 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 TMEM248Q9NWD8 314 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 UVRAGQ9P2Y5 699 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF212Q9UDV6 495 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 PCSK1NQ9UHG2 260 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 SLC25A13Q9UJS0 675 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 INVSQ9Y283 1065 aa10.97□□□□□ -0.65
LINC00239-201ENST00000556973 MAP3K13O43283 966 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 PRPSAP2O60256 369 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 LRCH4O75427 683 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 RETP07949 1114 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 TMEM253P0C7T8 217 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms