RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TNNC1P63316 161 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 RTP5Q14D33 572 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 ASIC2Q16515 512 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 ATG14Q6ZNE5 492 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 CCDC170Q8IYT3 715 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SORCS1Q8WY21 1168 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 BIRC7Q96CA5 298 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 NACA2Q9H009 215 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 VRTNQ9H8Y1 702 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-219ENST00000556951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSEN1-219ENST00000556951 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SCML2Q9UQR0 700 aa13.22□□□□□ -0.29
PSEN1-219ENST00000556951 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
PSEN1-219ENST00000556951 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CCDC130P13994 396 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 JUPP14923 745 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 FERP16591 822 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 ATICP31939 592 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 MAP3K7CLP57077 242 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 IL9RQ01113 521 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 NFATC3Q12968 1075 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 BIRC3Q13489 604 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CAMK2GQ13555 558 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-219ENST00000556951 RAPGEF1Q13905 1077 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 SHBQ15464 509 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 PRAMEF14Q5SWL7 426 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 GJB7Q6PEY0 223 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.29
PSEN1-219ENST00000556951 NT5C1BQ96P26 610 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CHP1Q99653 195 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 FBXO44Q9H4M3 255 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-219ENST00000556951 CPNE5Q9HCH3 593 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
PSEN1-219ENST00000556951 MAN2B2Q9Y2E5 1009 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 PCDHGA1Q9Y5H4 931 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-219ENST00000556951 MYH10P35580 1976 aa13.21□□□□□ -0.29
PSEN1-219ENST00000556951 MYLKQ15746 1914 aa13.21□□□□□ -0.3
PSEN1-219ENST00000556951 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CYP26A1O43174 497 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 VNN1O95497 513 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CCDC172P0C7W6 258 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 ACADMP11310 421 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 RARGP13631 454 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SOX5P35711 763 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CCT8P50990 548 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 UCNP55089 124 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 ORC1Q13415 861 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 E4F1Q66K89 784 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CLEC18BQ6UXF7 455 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 IRF2BP2Q7Z5L9 587 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 GATAD2AQ86YP4 633 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 ZNF276Q8N554 614 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 OR2T3Q8NH03 318 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SNX19Q92543 992 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 TSC1Q92574 1164 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 CCDC42Q96M95 316 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
PSEN1-219ENST00000556951 AJAP1Q9UKB5 411 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-219ENST00000556951 NF1P21359 2839 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 C10orf142B7Z368 130 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 F8VZ95 297 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 ENC1O14682 589 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 WNT1P04628 370 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 EPHX1P07099 455 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 CD27P26842 260 aa13.19□□□□□ -0.3
PSEN1-219ENST00000556951 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms