RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ANGPT1Q15389 498 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 NLRP14Q86W24 1093 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 PRSS33Q8NF86 280 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 HHIPQ96QV1 700 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 MUC3BQ9H195 1237 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 GOLPH3Q9H4A6 298 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 PRMT8Q9NR22 394 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-225ENST00000556798 KLHL11Q9NVR0 708 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 THAP10Q9P2Z0 257 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-225ENST00000556798 DNAI1Q9UI46 699 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 LCMT1Q9UIC8 334 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 MMP17Q9ULZ9 603 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 DUSP10Q9Y6W6 482 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 FANCMQ8IYD8 2048 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 MUC6Q6W4X9 2439 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 A0A0D9SEW6 157 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 WASH3PC4AMC7 463 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 BUB1O43683 1085 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 MOCS3O95396 460 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHMT2-225ENST00000556798 GOT1P17174 413 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 NTSR1P30989 418 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 ARHGAP25P42331 645 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 IL12RB1P42701 662 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 KRT83P78385 493 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 DMC1Q14565 340 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF234Q14588 700 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 HADHQ16836 314 aaKnown RBP17.96■□□□□ 0.47
SHMT2-225ENST00000556798 PTPRNQ16849 979 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 ATP13A4Q4VNC1 1196 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 BOLA3Q53S33 107 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 C6orf118Q5T5N4 469 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 TMEM92Q6UXU6 159 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 SYT13Q7L8C5 426 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 SETD3Q86TU7 594 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-225ENST00000556798 PSTKQ8IV42 348 aaKnown RBP17.96■□□□□ 0.47
SHMT2-225ENST00000556798 OR7D4Q8NG98 312 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 KCNV2Q8TDN2 545 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 TEKT4Q8WW24 435 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
SHMT2-225ENST00000556798 ALG14Q96F25 216 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 TMEM248Q9NWD8 314 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 TRIM10Q9UDY6 481 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 RAPGEFL1Q9UHV5 662 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 VPS28Q9UK41 221 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 RAD54BQ9Y620 910 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 STON1Q9Y6Q2 735 aa17.96■□□□□ 0.47
SHMT2-225ENST00000556798 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 A0A0A6YYK5 440 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 TIMM44O43615 452 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 BUB1BO60566 1050 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 DLDP09622 509 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 HLA-EP13747 358 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 HOXB2P14652 356 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 COL9A1P20849 921 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 PRKCHP24723 683 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 NUBP1P53384 320 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 HADHBP55084 474 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 OXCT1P55809 520 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 CSTF1Q05048 431 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 SLC12A1Q13621 1099 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 DPYSL2Q16555 572 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 FNDC3BQ53EP0 1204 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 EOGTQ5NDL2 527 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 TRMT11Q7Z4G4 463 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 ZNF366Q8N895 744 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 RTL3Q8N8U3 475 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 TTC17Q96AE7 1141 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 FEM1AQ9BSK4 669 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 CWC15Q9P013 229 aaKnown RBP17.95■□□□□ 0.46
SHMT2-225ENST00000556798 SLC8A2Q9UPR5 921 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 OR51B4Q9Y5P0 310 aa17.95■□□□□ 0.46
SHMT2-225ENST00000556798 H0Y858 1186 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 K7ESF4 209 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 PJA2O43164 708 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 SNAP91O60641 907 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 ATP5BP06576 529 aaKnown RBP17.94■□□□□ 0.46
SHMT2-225ENST00000556798 CD48P09326 243 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 TNNT1P13805 278 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 COMTP21964 271 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 MAPKAPK2P49137 400 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 STK19P49842 368 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-225ENST00000556798 PLK1P53350 603 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 NAP1L1P55209 391 aaKnown RBP17.94■□□□□ 0.46
SHMT2-225ENST00000556798 TCF15Q12870 199 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 KRT81Q14533 505 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 CRY1Q16526 586 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 HSF5Q4G112 596 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-225ENST00000556798 SDE2Q6IQ49 451 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 SERPINA13PQ6UXR4 307 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 MAMSTRQ6ZN01 415 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 RFX8Q6ZV50 586 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 RPL10LQ96L21 214 aaKnown RBP17.94■□□□□ 0.46
SHMT2-225ENST00000556798 PSMB7Q99436 277 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 GABRG3Q99928 467 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 SPON2Q9BUD6 331 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 CATSPERBQ9H7T0 1116 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 PCDH18Q9HCL0 1135 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 PLA2G4CQ9UP65 541 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms