RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PLCB1Q9NQ66 1216 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MBD1Q9UIS9 605 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 PILRBQ9UKJ0 227 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SCML1Q9UN30 329 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SPTBN2O15020 2390 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 M0QYT0 321 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GRAP2O75791 330 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 LUC7L3O95232 432 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CCDC172P0C7W6 258 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TACR2P21452 398 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC6A4P31645 630 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RDXP35241 583 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MATKP42679 507 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MAPK8P45983 427 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RAB15P59190 212 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SH3BP2P78314 561 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 ECT2LQ008S8 904 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 MYL5Q02045 173 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CAMK2GQ13555 558 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TAF5Q15542 800 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 PLEKHG6Q3KR16 790 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RAP1GAP2Q684P5 730 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TMEM215Q68D42 235 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 LRRC31Q6UY01 552 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC26A9Q7LBE3 791 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 WDTC1Q8N5D0 677 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 KDM1BQ8NB78 822 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RPRD1AQ96P16 312 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SLC2A13Q96QE2 648 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GTPBP2Q9BX10 602 aaKnown RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GPR174Q9BXC1 333 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 BTBD1Q9H0C5 482 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TSPAN10Q9H1Z9 355 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TMEM245Q9H330 911 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 SIX2Q9NPC8 291 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 RXFP3Q9NSD7 469 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 FAM207AQ9NSI2 230 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TMEM74BQ9NUR3 256 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 WSB2Q9NYS7 404 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCFD1-222ENST00000556768 CYTH4Q9UIA0 394 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 GREB1Q4ZG55 1949 aa7.57□□□□□ -1.2
SCFD1-222ENST00000556768 DENND4CQ5VZ89 1909 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ANAPC1Q9H1A4 1944 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 A0A1B0GVM2 712 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 MED19A0JLT2 244 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 TCAF2A6NFQ2 919 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 PATE3B3GLJ2 98 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ERVH48-1M5A8F1 160 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 SRPRAP08240 638 aaKnown RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 HLA-EP13747 358 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF18P17022 549 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ENGP17813 658 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 PRKCHP24723 683 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 CD70P32970 193 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 CSKP41240 450 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 GDF10P55107 478 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 POLR2FP61218 127 aaKnown RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 DAB2P98082 770 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 UBXN1Q04323 297 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF177Q13360 481 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 KRT31Q15323 416 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 CCDC183Q5T5S1 534 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FAM102AQ5T9C2 384 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 NADSYN1Q6IA69 706 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ALKBH2Q6NS38 261 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 OLFML1Q6UWY5 402 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FAM183BPQ6ZVS7 135 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 KIAA0907Q7Z7F0 614 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FAM124AQ86V42 546 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 CACUL1Q86Y37 369 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ZNF397Q8NF99 534 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 NEK11Q8NG66 645 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 GPT2Q8TD30 523 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 TTC17Q96AE7 1141 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 P2RY11Q96G91 374 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 ZDHHC5Q9C0B5 715 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 SIK2Q9H0K1 926 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 MIR1-1HGQ9H1L0 117 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 PCED1AQ9H1Q7 454 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 CD248Q9HCU0 757 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 USP36Q9P275 1121 aaKnown RBP7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FHOD1Q9Y613 1164 aa7.56□□□□□ -1.2
SCFD1-222ENST00000556768 FANCMQ8IYD8 2048 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
SCFD1-222ENST00000556768 F8VZ95 297 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 OPHN1O60890 802 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 CLDN11O75508 207 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 IGLV3-25P01717 112 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 ERBB2P04626 1255 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 ADRB1P08588 477 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 PNMA6AP0CW24 399 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-222ENST00000556768 CEACAM1P13688 526 aa7.55□□□□□ -1.2
SCFD1-222ENST00000556768 DESP17661 470 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms