RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CLEC16AQ2KHT3 1053 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 FILIP1LQ4L180 1135 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 ALFQ53S48 1182 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 PPM1JQ5JR12 505 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 C9orf64Q5T6V5 341 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 TRIM72Q6ZMU5 477 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 MON1BQ7L1V2 547 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 JOSD2Q8TAC2 188 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 PCMTD1Q96MG8 357 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-224ENST00000556737 SYT11Q9BT88 431 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 RSPH9Q9H1X1 276 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-224ENST00000556737 ZNF212Q9UDV6 495 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 TP53BP1Q12888 1972 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PI4KAP42356 2102 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 NUMA1Q14980 2115 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 IGLV3-10A0A075B6K4 115 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 TCRBV5S1A1TA0A578 114 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 C2CD4BA6NLJ0 364 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 C10orf142B7Z368 130 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 CLDN11O75508 207 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ENDOD1O94919 500 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 SERPINF2P08697 491 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ACADMP11310 421 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 VAV1P15498 845 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ENGP17813 658 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ACSL1P33121 698 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ST8SIA6P61647 398 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ECT2LQ008S8 904 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ZBTB16Q05516 673 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 E4F1Q66K89 784 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 ZNF776Q68DI1 518 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 IL31Q6EBC2 164 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PHLDB2Q86SQ0 1253 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 FAM124AQ86V42 546 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PHF13Q86YI8 300 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 CCDC117Q8IWD4 279 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 CADM4Q8NFZ8 388 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 FRS2Q8WU20 508 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 DNASE2BQ8WZ79 361 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PSMB7Q99436 277 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 GPR174Q9BXC1 333 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 TTYH3Q9C0H2 523 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 SIK2Q9H0K1 926 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PABPC3Q9H361 631 aaKnown RBP10.63□□□□□ -0.71
SHMT2-224ENST00000556737 WDCPQ9H6R7 721 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 TMEM9BQ9NQ34 198 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 IFNKQ9P0W0 207 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 SERGEFQ9UGK8 458 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 SLCO3A1Q9UIG8 710 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 NEU3Q9UQ49 428 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 TBC1D30Q9Y2I9 924 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 SLCO1B1Q9Y6L6 691 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 PLXNA2O75051 1894 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 CHD5Q8TDI0 1954 aa10.63□□□□□ -0.71
SHMT2-224ENST00000556737 CACNA1EQ15878 2313 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 A0A1B0GTH6 734 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 EDDM13A0A1B0GTR0 161 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 DRGXA6NNA5 263 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 METTL12A8MUP2 240 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 MEI4A8MW99 385 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 NDUFS2O75306 463 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 MOCS3O95396 460 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 F9P00740 461 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 DNTTP04053 509 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 CFIP05156 583 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 PTMAP06454 111 aaKnown RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 OXTRP30559 389 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 PTPN9P43378 593 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 NSFP46459 744 aaKnown RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 CDH4P55283 916 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 UBASH3AP57075 661 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 DUOXA1Q1HG43 343 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 C15orf59Q2T9L4 293 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 CCDC14Q49A88 953 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 SH3PXD2AQ5TCZ1 1133 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 MANEALQ5VSG8 457 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 DCAF12L1Q5VU92 463 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 RABEPKQ7Z6M1 372 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 FAM131BQ86XD5 332 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 C3orf20Q8ND61 904 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 CEP76Q8TAP6 659 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 RXFP2Q8WXD0 754 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 PTPRN2Q92932 1015 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 RPL10LQ96L21 214 aaKnown RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 FAM129BQ96TA1 746 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 AGPAT1Q99943 283 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 FEM1AQ9BSK4 669 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 NUP58Q9BVL2 599 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 NUSAP1Q9BXS6 441 aaKnown RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 PCED1AQ9H1Q7 454 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 C6orf106Q9H6K1 298 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-224ENST00000556737 SUN2Q9UH99 717 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 SLC6A14Q9UN76 642 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 PAXBP1Q9Y5B6 917 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 SPTBN2O15020 2390 aa10.62□□□□□ -0.71
SHMT2-224ENST00000556737 A0A1W2PQC6 194 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms