RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CCDC15Q0P6D6 951 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 MAPRE1Q15691 268 aaKnown RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 LGSNQ5TDP6 509 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 MANEALQ5VSG8 457 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 LHX8Q68G74 356 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 SPATA22Q8NHS9 363 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 RAET1EQ8TD07 263 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 MTBPQ96DY7 904 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 ATXN7L3BQ96GX2 97 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 CAPNS2Q96L46 248 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 FCRL2Q96LA5 508 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-211ENST00000556648 TMEM237Q96Q45 408 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 GMIPQ9P107 970 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 VANGL2Q9ULK5 521 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
TMEM260-211ENST00000556648 ARHGAP42A6NI28 874 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 ATP9BO43861 1147 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 KRT16P08779 473 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 MX2P20592 715 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 SERPINB6P35237 376 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 FAM189BP81408 668 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 NOGQ13253 232 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 PDE1CQ14123 709 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-211ENST00000556648 GPNMBQ14956 572 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 CHI3L2Q15782 390 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 PPM1JQ5JR12 505 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
TMEM260-211ENST00000556648 FYB2Q5VWT5 728 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 TIFABQ6ZNK6 161 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 ZCCHC23Q6ZST2 131 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 ASRGL1Q7L266 308 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 CEP57Q86XR8 500 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 GBP7Q8N8V2 638 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-211ENST00000556648 DNAAF3Q8N9W5 541 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 URGCPQ8TCY9 931 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 CERS2Q96G23 380 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 TEKT5Q96M29 485 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 AGAP2Q99490 1192 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 SLC39A8Q9C0K1 460 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 KCNK13Q9HB14 408 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 CD248Q9HCU0 757 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 ABCC13Q9NSE7 274 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 MPP6Q9NZW5 540 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 HS3ST4Q9Y661 456 aa10.35□□□□□ -0.75
TMEM260-211ENST00000556648 A0A0G2JND7 137 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ZCWPW2A0A1B0GU75 182 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 FAM237BA0A1B0GVD1 139 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 NCAM2O15394 837 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 NBNO60934 754 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 OAZ2O95190 189 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CBX6O95503 412 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 EOMESO95936 686 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 PRKCGP05129 697 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TROVE2P10155 538 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 HOXC13P31276 330 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 PBX3P40426 434 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 BST1Q10588 318 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SPANXN3Q5MJ09 141 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 BRMS1LQ5PSV4 323 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 PIK3R6Q5UE93 754 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ZNF449Q6P9G9 518 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CYS1Q717R9 158 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 BEND5Q7L4P6 421 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CMC1Q7Z7K0 106 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ATAD1Q8NBU5 361 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 LRRC37BQ96QE4 947 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TMEM120AQ9BXJ8 343 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 C20orf27Q9GZN8 174 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 HAO1Q9UJM8 370 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CFAP73A6NFT4 308 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 KCNU1A8MYU2 1149 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 GOLGA8TH3BQL2 631 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 TMEM189-UBE2V1I3L0A0 370 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 C2CD2LO14523 706 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 UNC5CO95185 931 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 MT-CYBP00156 380 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-211ENST00000556648 GSRP00390 522 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 POLBP06746 335 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CCNB1P14635 433 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 NMBRP28336 390 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CCR1P32246 355 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 CRHR1P34998 444 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ARPP19P56211 112 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 SETDB1Q15047 1291 aa10.34□□□□□ -0.75
TMEM260-211ENST00000556648 ANKRD20A4Q4UJ75 823 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms