RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DTLQ9NZJ0 730 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 KIAA1522Q9P206 1035 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 PCYOX1Q9UHG3 505 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 RASA4BC9J798 803 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TRDMT1O14717 391 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 CHADO15335 359 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 RASA4O43374 803 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 MBTPS2O43462 519 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 CNTN5O94779 1100 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 LUC7L3O95232 432 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 PSMC3P17980 439 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 CCNCP24863 283 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 VIPR2P41587 438 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 GEMIN4P57678 1058 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 RPS24P62847 133 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 ZXDBP98169 803 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 GNA12Q03113 381 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 GBE1Q04446 702 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 ADCY2Q08462 1091 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 GALNT2Q10471 571 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 E2F5Q15329 346 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 ALFQ53S48 1182 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 SLC45A4Q5BKX6 768 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TEX35Q5T0J7 233 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 IL31Q6EBC2 164 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TANGO2Q6ICL3 276 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 NPNTQ6UXI9 565 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TPGS1Q6ZTW0 290 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 CCDC13Q8IYE1 715 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 CPA6Q8N4T0 437 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 SLC35B2Q8TB61 432 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 RUBCNQ92622 972 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 SLCO2A1Q92959 643 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 WBP2Q969T9 261 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 LRRC45Q96CN5 670 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 HDAC11Q96DB2 347 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 GUCD1Q96NT3 240 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 VAT1Q99536 393 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TRMT61BQ9BVS5 477 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 BBS2Q9BXC9 721 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 SLC39A8Q9C0K1 460 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 DDX47Q9H0S4 455 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 ETNK2Q9NVF9 386 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 DNPEPQ9ULA0 475 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TBC1D30Q9Y2I9 924 aa9.45□□□□□ -0.9
ACTN1-218ENST00000556343 R3HDM2Q9Y2K5 976 aaKnown RBP9.45□□□□□ -0.9
ACTN1-218ENST00000556343 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 ZSCAN5CA6NGD5 496 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 KCNN4O15554 427 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 MFSD11O43934 449 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 IFNB1P01574 187 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 KRT14P02533 472 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PECAM1P16284 738 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 GARSP41250 739 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PAPOLAP51003 745 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 RENBPP51606 427 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 SULT2A1Q06520 285 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PPIDQ08752 370 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 FCHO2Q0JRZ9 810 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 DMC1Q14565 340 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 DHCR24Q15392 516 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 OASLQ15646 514 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 AAK1Q2M2I8 961 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 LY6G5CQ5SRR4 150 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 RNF219Q5W0B1 726 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 AFMIDQ63HM1 303 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PCGF5Q86SE9 256 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 IFT20Q8IY31 132 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 ALLCQ8N6M5 410 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 CSGALNACT1Q8TDX6 532 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 HTR3CQ8WXA8 447 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 ATG4AQ8WYN0 398 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 FATE1Q969F0 183 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 CELF6Q96J87 481 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 ZNF599Q96NL3 588 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 TSGA13Q96PP4 275 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PPP1R2P1Q96PQ5 205 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 QKIQ96PU8 341 aaKnown RBP eCLIP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 HERPUD2Q9BSE4 406 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 SPON2Q9BUD6 331 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 LINC00597Q9H2U6 94 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 SP110Q9HB58 689 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 ATP13A1Q9HD20 1204 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 PAK5Q9P286 719 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 IGSF9Q9P2J2 1179 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 SAE1Q9UBE0 346 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 AMACRQ9UHK6 382 aa9.44□□□□□ -0.9
ACTN1-218ENST00000556343 IPO11Q9UI26 975 aaKnown RBP9.44□□□□□ -0.9
ACTN1-218ENST00000556343 TRHDEQ9UKU6 1024 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms