RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CDK5R2Q13319 367 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ZRSR1Q15695 479 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 IL17AQ16552 155 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 HYIQ5T013 277 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 SNX30Q5VWJ9 437 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 OGFOD2Q6N063 350 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 LAYNQ6UX15 382 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 TPGS1Q6ZTW0 290 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 HTR3DQ70Z44 454 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 GATAD2AQ86YP4 633 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 MYCT1Q8N699 235 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 DCBLD1Q8N8Z6 715 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 NECAB1Q8N987 351 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 CACTINQ8WUQ7 758 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 KBTBD7Q8WVZ9 684 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 OVCA2Q8WZ82 227 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 PCED1BQ96HM7 432 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 HIC2Q96JB3 615 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ZNF578Q96N58 590 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ELF4Q99607 663 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 TRIM9Q9C026 710 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 FOXP1Q9H334 677 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 GPN3Q9UHW5 284 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ODF2LQ9ULJ1 636 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 CLCA2Q9UQC9 943 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-236ENST00000556220 SOWAHDA6NJG2 315 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 TISP43B9A030 160 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 K7ENM7 598 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 BIN1O00499 593 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 VILLO15195 856 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 TSPAN3O60637 253 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 JAK2O60674 1132 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ITGAVP06756 1048 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 CD27P26842 260 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ACSL1P33121 698 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ABCD1P33897 745 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 TUBP50607 506 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ZNF131P52739 623 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 COPAP53621 1224 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 GUCY1B3Q02153 619 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 POSTNQ15063 836 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 PLCL1Q15111 1095 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 SHBQ15464 509 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 PRAMEF14Q5SWL7 426 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
ATXN3-236ENST00000556220 FAM124AQ86V42 546 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 DHX40Q8IX18 779 aaKnown RBP7.22□□□□□ -1.25
ATXN3-236ENST00000556220 NUP93Q8N1F7 819 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 EID2Q8N6I1 236 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 POU5F2Q8N7G0 328 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 MYCBPAPQ8TBZ2 947 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 SAP25Q8TEE9 199 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 GTF3C6Q969F1 213 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 FBXO32Q969P5 355 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 FIZ1Q96SL8 496 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 TRIM4Q9C037 500 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 PARVGQ9HBI0 331 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ANKMY1Q9P2S6 941 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 ITGA11Q9UKX5 1188 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 SLC27A6Q9Y2P4 619 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 HEMK1Q9Y5R4 338 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-236ENST00000556220 TSC2P49815 1807 aa7.22□□□□□ -1.25
ATXN3-236ENST00000556220 FLNCQ14315 2725 aa7.21□□□□□ -1.25
ATXN3-236ENST00000556220 BOD1L1Q8NFC6 3051 aa7.21□□□□□ -1.25
ATXN3-236ENST00000556220 ABCA12Q86UK0 2595 aa7.21□□□□□ -1.25
ATXN3-236ENST00000556220 MUC22E2RYF6 1773 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-236ENST00000556220 KLK10O43240 276 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 RNGTTO60942 597 aaKnown RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 RTN3O95197 1032 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 MT-CO3P00414 261 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 KRT19P08727 400 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ZDHHC11BP0C7U3 371 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 IRF1P10914 325 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 GP1BBP13224 206 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 CKMT2P17540 419 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ABCB4P21439 1286 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 WARSP23381 471 aaKnown RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ARNTP27540 789 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 GNL1P36915 607 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 CACNA2D1P54289 1103 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 BCAT1P54687 386 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 CDH8P55286 799 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 C21orf59P57076 290 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 RACK1P63244 317 aaKnown RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 IFRD2Q12894 506 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ANKRD1Q15327 319 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 E2F5Q15329 346 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ME3Q16798 604 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 MDH1BQ5I0G3 518 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 HS2ST1Q7LGA3 356 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 WFDC3Q8IUB2 231 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 BRSK2Q8IWQ3 736 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 LSMEM2Q8N112 164 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 OR2T3Q8NH03 318 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 UCMAQ8WVF2 138 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms