RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 H2AFXP16104 143 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ME2P23368 584 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 GPD2P43304 727 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ALDH6A1Q02252 535 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 GLRA4Q5JXX5 417 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 DACT2Q5SW24 774 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 AFTPHQ6ULP2 937 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 FAM92BQ6ZTR7 304 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SYTL1Q8IYJ3 562 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ATG16L2Q8NAA4 619 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 LPCAT1Q8NF37 534 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 PROX1Q92786 737 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 USP7Q93009 1102 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SPATA13Q96N96 652 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SH2D3AQ9BRG2 576 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ZCCHC17Q9NP64 241 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 PALMDQ9NP74 551 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ZDHHC4Q9NPG8 344 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 VPS45Q9NRW7 570 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ADH1AP07327 375 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SLC2A4P14672 509 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CSHL1Q14406 222 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ARHGAP17Q68EM7 881 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 FAM117BQ6P1L5 589 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 PIWIL4Q7Z3Z4 852 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ADAMTSL2Q86TH1 951 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 DHFR2Q86XF0 187 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TOP6BLQ8N6T0 577 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CAAP1Q9H8G2 361 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 BCORL1Q5H9F3 1711 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 RIPK2O43353 540 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 MYL12AP19105 171 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TMED10P49755 219 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TOB1P50616 345 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 FAM171A1Q5VUB5 890 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TTC23Q5W5X9 447 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 NEK10Q6ZWH5 1172 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 GLT6D1Q7Z4J2 308 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TCAIMQ8N3R3 496 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 GINS4Q9BRT9 223 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.91□□□□□ -0.663e-10■■□□□ 13.4
ACTN1-216ENST00000556083 ARHGAP20Q9P2F6 1191 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 MICAL2O94851 1124 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 PCDH8O95206 1070 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 KRT75O95678 551 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 VTNP04004 478 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ADORA2AP29274 412 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 S100A3P33764 101 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 RPS7P62081 194 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 FOXD4Q12950 439 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 NOGQ13253 232 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 RFTN2Q52LD8 501 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SETMARQ53H47 684 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CELF3Q5SZQ8 465 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CYB5D1Q6P9G0 228 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TRMT11Q7Z4G4 463 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CLYBLQ8N0X4 340 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF786Q8N393 782 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 GALNT4Q8N4A0 578 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 METTL6Q8TCB7 284 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 RNFT2Q96EX2 444 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 BBS4Q96RK4 519 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 FUT8Q9BYC5 575 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ATP13A3Q9H7F0 1226 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 GPRC5CQ9NQ84 441 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SNTG2Q9NY99 539 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 MARCH2Q9P0N8 246 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SKAP2O75563 359 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TNFAIP8O95379 198 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.669e-8■□□□□ 11
ACTN1-216ENST00000556083 LBPP18428 481 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CDC25CP30307 473 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CASP4P49662 377 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 ADIGQ0VDE8 80 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 INO80DQ53TQ3 878 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 POTEHQ6S545 545 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 FAM126BQ8IXS8 530 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
ACTN1-216ENST00000556083 PNKPQ96T60 521 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TINF2Q9BSI4 451 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 CNGB3Q9NQW8 809 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 TBC1D30Q9Y2I9 924 aa10.91□□□□□ -0.66
ACTN1-216ENST00000556083 A0A096LPK6 155 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 ZBTB39O15060 712 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 MAFO75444 373 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 ABCB1P08183 1280 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 FAM58BPP0C7Q3 252 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 CENPAP49450 140 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 NEK3P51956 506 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 THOP1P52888 689 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 GRIK3Q13003 919 aa10.9□□□□□ -0.66
ACTN1-216ENST00000556083 NBPF12Q5TAG4 269 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-216ENST00000556083 DCLRE1AQ6PJP8 1040 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms