RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GEMIN4P57678 1058 aaKnown RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 GNA12Q03113 381 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 KDSRQ06136 332 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 LMAN2Q12907 356 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 DPYSL3Q14195 570 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 UBXN2BQ14CS0 331 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 POLD3Q15054 466 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 PON2Q15165 354 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 GAB4Q2WGN9 574 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 PARP15Q460N3 678 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 HSF5Q4G112 596 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 ATP13A4Q4VNC1 1196 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 TFDP3Q5H9I0 405 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 ZNF569Q5MCW4 686 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 CCDC181Q5TID7 509 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 RNF219Q5W0B1 726 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 SDE2Q6IQ49 451 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 BZW1Q7L1Q6 419 aaKnown RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 TRMT11Q7Z4G4 463 aaKnown RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 C12orf40Q86WS4 652 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 CIR1Q86X95 450 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 ZNF354CQ86Y25 554 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 CPNE8Q86YQ8 564 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 UMODL1-AS1Q8N2C9 162 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.84□□□□□ -1.15
TDP1-214ENST00000556063 RAPGEF5Q92565 580 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 ACDQ96AP0 544 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 RNF25Q96BH1 459 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 MYEOVQ96EZ4 313 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 RNF157Q96PX1 679 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 SPON2Q9BUD6 331 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 CIPCQ9C0C6 399 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 MUC3BQ9H195 1237 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 LTB4R2Q9NPC1 389 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 KLHL11Q9NVR0 708 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 VPS28Q9UK41 221 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 NDRG2Q9UN36 371 aaKnown RBP7.84□□□□□ -1.15
TDP1-214ENST00000556063 PLA2G4CQ9UP65 541 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 SLC8A2Q9UPR5 921 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 JRKLQ9Y4A0 524 aa7.84□□□□□ -1.15
TDP1-214ENST00000556063 CUL9Q8IWT3 2517 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 TMEM221A6NGB7 291 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ZSCAN5CA6NGD5 496 aaPredicted RBP7.83□□□□□ -1.16
TDP1-214ENST00000556063 FAM170BA6NMN3 283 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 M0R296 226 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 APOL1O14791 398 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ATG13O75143 517 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 TJP3O95049 919 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 DLDP09622 509 aaKnown RBP7.83□□□□□ -1.16
TDP1-214ENST00000556063 MX2P20592 715 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 AMPD1P23109 780 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 HLA-FP30511 346 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CD70P32970 193 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CSKP41240 450 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 DNA2P51530 1060 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 IRAK1P51617 712 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ST8SIA6P61647 398 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 GNG11P61952 73 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 MRPS21P82921 87 aaKnown RBP7.83□□□□□ -1.16
TDP1-214ENST00000556063 SLC20A2Q08357 652 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 MMRN1Q13201 1228 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 DPYSQ14117 519 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 PPP2R5EQ16537 467 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 PLEKHG6Q3KR16 790 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ANKRD20A8PQ5CZ79 823 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 PITRM1Q5JRX3 1037 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 SEL1L2Q5TEA6 688 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 MEI1Q5TIA1 1274 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 MBLAC2Q68D91 279 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 IL31Q6EBC2 164 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 FSTL4Q6MZW2 842 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CXorf57Q6NSI4 855 aaKnown RBP7.83□□□□□ -1.16
TDP1-214ENST00000556063 RETSATQ6NUM9 610 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 SPOCD1Q6ZMY3 1216 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 METTL3Q86U44 580 aaKnown RBP7.83□□□□□ -1.16
TDP1-214ENST00000556063 NLRP14Q86W24 1093 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 RFX6Q8HWS3 928 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 LRRC49Q8IUZ0 686 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 DCAF4L2Q8NA75 395 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 FLCNQ8NFG4 579 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 TSC1Q92574 1164 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 KRT35Q92764 455 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 FAF2Q96CS3 445 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CHFRQ96EP1 664 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 HES6Q96HZ4 224 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 FEM1AQ9BSK4 669 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 IER2Q9BTL4 223 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 MAGEB5Q9BZ81 275 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CARD9Q9H257 536 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ATP13A1Q9HD20 1204 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ELOVL2Q9NXB9 296 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 DNAI1Q9UI46 699 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 SLC25A13Q9UJS0 675 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CLEC4EQ9ULY5 219 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 EFR3BQ9Y2G0 817 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 ZKSCAN5Q9Y2L8 839 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 SIT1Q9Y3P8 196 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms