RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 BHMTQ93088 406 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LRRC3BQ96PB8 259 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 FAM118BQ9BPY3 351 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 BRD8Q9H0E9 1235 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 LRRC19Q9H756 370 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 DTLQ9NZJ0 730 aa11.33□□□□□ -0.6
TMEM260-208ENST00000555905 FEZ2Q9UHY8 353 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-208ENST00000555905 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 HACD1B0YJ81 288 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 H0Y626 953 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 DFFAO00273 331 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 RAMP2O60895 175 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 LUC7L3O95232 432 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 NFATC1O95644 943 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 RHOCP08134 193 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 PSMC3P17980 439 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 FNTAP49354 379 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 OXCT1P55809 520 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 YBEYP58557 167 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 TUBB4BP68371 445 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 LMNB2Q03252 620 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 FCHO2Q0JRZ9 810 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 SLC10A2Q12908 348 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ANO4Q32M45 955 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 EML3Q32P44 896 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 PARP15Q460N3 678 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC137Q6PK04 289 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 PARM1Q6UWI2 310 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 VITQ6UXI7 678 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF783Q6ZMS7 281 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ZC3H18Q86VM9 953 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 TMEM25Q86YD3 366 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CDKL3Q8IVW4 592 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 MFN1Q8IWA4 741 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 NPWQ8N729 165 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF557Q8N988 423 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 MAFAQ8NHW3 353 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 SLC35B2Q8TB61 432 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 NKD2Q969F2 451 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CELF6Q96J87 481 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC114Q96M63 670 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 KRT12Q99456 494 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 PHF7Q9BWX1 381 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF148Q9UQR1 794 aa11.32□□□□□ -0.6
TMEM260-208ENST00000555905 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-208ENST00000555905 NUP205Q92621 2012 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ILVBLA1L0T0 632 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 NEDD8-MDP1E9PL57 170 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ITGAVP06756 1048 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 RBP3P10745 1247 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 HOXD9P28356 352 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ETFBP38117 255 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 GALNT2Q10471 571 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 NR1H3Q13133 447 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 HTR4Q13639 388 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 DHCR24Q15392 516 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 SMAD2Q15796 467 aaKnown RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 FYB2Q5VWT5 728 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 GSTA5Q7RTV2 222 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 MAATS1Q7Z4T9 603 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ZNF354CQ86Y25 554 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 CPA6Q8N4T0 437 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 MMGT1Q8N4V1 131 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ATPAF2Q8N5M1 289 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 CCNYQ8ND76 341 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ST13P5Q8NFI4 369 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 ATL2Q8NHH9 583 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 FGF14Q92915 247 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 OLFM3Q96PB7 478 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 TRMT61BQ9BVS5 477 aaKnown RBP11.31□□□□□ -0.6
TMEM260-208ENST00000555905 SLC39A8Q9C0K1 460 aa11.31□□□□□ -0.6
TMEM260-208ENST00000555905 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms