RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 FTLP02792 175 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 RHOCP08134 193 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 SRPRAP08240 638 aaKnown RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 GZMAP12544 262 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 CASP14P31944 242 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 ADRA1BP35368 520 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 MPLP40238 635 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 STK19P49842 368 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 PLK1P53350 603 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 RPL6Q02878 288 aaKnown RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 CREB5Q02930 508 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 ARL13BQ3SXY8 428 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 MANEALQ5VSG8 457 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 RNF219Q5W0B1 726 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 PLEKHA7Q6IQ23 1121 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 LPCAT2Q7L5N7 544 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 DGLUCYQ7Z3D6 616 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 GPR161Q8N6U8 529 aaKnown RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 OR2T3Q8NH03 318 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 PRCCQ92733 491 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 NTAN1Q96AB6 310 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 ZNF653Q96CK0 615 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 SIPA1Q96FS4 1042 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 FEM1AQ9BSK4 669 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 CNPY3Q9BT09 278 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 PRSS16Q9NQE7 514 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 PARVAQ9NVD7 372 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 USP36Q9P275 1121 aaKnown RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 ZNF212Q9UDV6 495 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 VPS28Q9UK41 221 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 OR51B4Q9Y5P0 310 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 EP300Q09472 2414 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-219ENST00000555563 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
SHMT2-219ENST00000555563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 TTC34A8MYJ7 566 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SIN3BO75182 1162 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 RTN2O75298 545 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SERPING1P05155 500 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 PTGER3P43115 390 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 DHPSP49366 369 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 NRG1Q02297 640 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ZNF252P-AS1Q0IIN9 211 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SCAPQ12770 1279 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 PUM1Q14671 1186 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 CSRP2Q16527 193 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 HNRNPA1L2Q32P51 320 aaKnown RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SPECC1LQ69YQ0 1117 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SLC36A4Q6YBV0 504 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ARMCX6Q7L4S7 300 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 CYP2U1Q7Z449 544 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 TMEFF1Q8IYR6 380 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ABCA7Q8IZY2 2146 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 KDM1BQ8NB78 822 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 MAGEB5Q9BZ81 275 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 TRIM7Q9C029 511 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ZYG11BQ9C0D3 744 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 MUC3BQ9H195 1237 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SMOC1Q9H4F8 434 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 FBRSQ9HAH7 460 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 PPARGC1AQ9UBK2 798 aaKnown RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 CNOT8Q9UFF9 292 aaKnown RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 OR12D3Q9UGF7 316 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SUN2Q9UH99 717 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 ADAMTS1Q9UHI8 967 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 SLCO3A1Q9UIG8 710 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 NEU3Q9UQ49 428 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.1□□□□□ -0.15
SHMT2-219ENST00000555563 DOCK4Q8N1I0 1966 aa14.1□□□□□ -0.15
SHMT2-219ENST00000555563 BCLAF3A2AJT9 711 aaKnown RBP14.09□□□□□ -0.15
SHMT2-219ENST00000555563 FAM72CH0Y354 149 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 LRIG2O94898 1065 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 PSMA2P25787 234 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 OR1E1P30953 314 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 TPMTP51580 245 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 RPS14P62263 151 aaKnown RBP14.09□□□□□ -0.15
SHMT2-219ENST00000555563 LMNB2Q03252 620 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 TRIM14Q14142 442 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 PLA2G2CQ5R387 149 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 C6orf118Q5T5N4 469 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 FAM72AQ5TYM5 149 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 FAM72DQ6L9T8 149 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 SLFN11Q7Z7L1 901 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 SETD3Q86TU7 594 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-219ENST00000555563 METTL3Q86U44 580 aaKnown RBP14.09□□□□□ -0.15
SHMT2-219ENST00000555563 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 FAM72BQ86X60 149 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 VSTM4Q8IW00 320 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 PSMB7Q99436 277 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 ISCUQ9H1K1 167 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 OSBPL2Q9H1P3 480 aa14.09□□□□□ -0.15
SHMT2-219ENST00000555563 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms