RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 GALNT2Q10471 571 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 XRCC4Q13426 336 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 PDK1Q15118 436 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 CCDC85BQ15834 202 aaPredicted RBP10.47□□□□□ -0.73
SRP54-208ENST00000555557 ZNF77Q15935 545 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 C5orf22Q49AR2 442 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 SLC45A4Q5BKX6 768 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 RABGAP1LQ5R372 815 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 DUPD1Q68J44 220 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 CES5AQ6NT32 575 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 TDRD5Q8NAT2 981 aaKnown RBP10.47□□□□□ -0.73
SRP54-208ENST00000555557 TMA16Q96EY4 203 aaKnown RBP10.47□□□□□ -0.73
SRP54-208ENST00000555557 QKIQ96PU8 341 aaKnown RBP eCLIP10.47□□□□□ -0.734e-9■■■■■ 35.8
SRP54-208ENST00000555557 DDX50Q9BQ39 737 aaKnown RBP10.47□□□□□ -0.73
SRP54-208ENST00000555557 CEP41Q9BYV8 373 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 GDF3Q9NR23 364 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 ASIC3Q9UHC3 531 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 NUP205Q92621 2012 aa10.47□□□□□ -0.73
SRP54-208ENST00000555557 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 KCNK1O00180 336 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 GFRA2O00451 464 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 MYBL2P10244 700 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 POU3F3P20264 500 aaPredicted RBP10.46□□□□□ -0.73
SRP54-208ENST00000555557 STIP1P31948 543 aaKnown RBP10.46□□□□□ -0.73
SRP54-208ENST00000555557 ADCY8P40145 1251 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 RPL21P46778 160 aaKnown RBP10.46□□□□□ -0.73
SRP54-208ENST00000555557 CDH4P55283 916 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 PTK6Q13882 451 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 AFMIDQ63HM1 303 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 CDKL3Q8IVW4 592 aaPredicted RBP10.46□□□□□ -0.73
SRP54-208ENST00000555557 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 UMODL1-AS1Q8N2C9 162 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 LZTR1Q8N653 840 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 CCDC89Q8N998 374 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 DDI1Q8WTU0 396 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 HTR3CQ8WXA8 447 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 HMCESQ96FZ2 354 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 ASB16Q96NS5 453 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 GAS2L1Q99501 681 aaPredicted RBP10.46□□□□□ -0.73
SRP54-208ENST00000555557 CLEC4EQ9ULY5 219 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 ZNF510Q9Y2H8 683 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
SRP54-208ENST00000555557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 RASA4BC9J798 803 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 H3BQ06 376 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 PPP1R12AO14974 1030 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 RASA4O43374 803 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 MX2P20592 715 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 RPL22P35268 128 aaKnown RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 CHKAP35790 457 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 ACVRL1P37023 503 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 PPIDQ08752 370 aaKnown RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 GPS1Q13098 491 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 ZNF177Q13360 481 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 POLD3Q15054 466 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 PRKD1Q15139 912 aaPredicted RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 FSCBQ5H9T9 825 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 HEATR6Q6AI08 1181 aaKnown RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 ZNF354CQ86Y25 554 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 TMEM25Q86YD3 366 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 IFT20Q8IY31 132 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 CARNMT1Q8N4J0 409 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 CELF5Q8N6W0 485 aaKnown RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 CCDC110Q8TBZ0 833 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 WFDC5Q8TCV5 224 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 PABPC5Q96DU9 382 aaKnown RBP10.46□□□□□ -0.74
SRP54-208ENST00000555557 MSLNLQ96KJ4 702 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 MYADMQ96S97 322 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 RAB17Q9H0T7 212 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 ZMYM5Q9UJ78 669 aa10.46□□□□□ -0.74
SRP54-208ENST00000555557 A0A1B0GVM2 712 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 TCAF2A6NFQ2 919 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 HACD1B0YJ81 288 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 F5H423 210 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 H0Y626 953 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 J3KR12 359 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 NCAM2O15394 837 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 MAFKO60675 156 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 RAMP2O60895 175 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CLDN11O75508 207 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 SP100P23497 879 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 IVDP26440 423 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 MAPKAPK2P49137 400 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 NDST2P52849 883 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 WASHC5Q12768 1159 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 USP4Q13107 963 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 SYCP2LQ5T4T6 812 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 TRIM68Q6AZZ1 485 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 TANGO2Q6ICL3 276 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 WDR93Q6P2C0 686 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CCNI2Q6ZMN8 369 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 LEKR1Q6ZMV7 388 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 SYDE1Q6ZW31 735 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 ADGRG2Q8IZP9 1017 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CPXM2Q8N436 756 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 ATPAF2Q8N5M1 289 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 OR7D4Q8NG98 312 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms