RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 GJC1P36383 396 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CXCR3P49682 368 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 GALK1P51570 392 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF143P52747 638 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DRG2P55039 364 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SEC13P55735 322 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 HDAC4P56524 1084 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 GSCP56915 257 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 PRKCQQ04759 706 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 MESP2Q0VG99 397 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 HLTFQ14527 1009 aaKnown RBP eCLIP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM153CQ494X1 144 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM133BQ5BKY9 247 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 PIK3R6Q5UE93 754 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DCAF12L1Q5VU92 463 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 RALGPS2Q86X27 583 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SFTPA1Q8IWL2 248 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF564Q8TBZ8 553 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 NT5C3BQ969T7 300 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TMA16Q96EY4 203 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 P2RY11Q96G91 374 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 BTN2A3PQ96KV6 586 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 P2RY13Q9BPV8 354 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DDX50Q9BQ39 737 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 HINFPQ9BQA5 517 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CNPY3Q9BT09 278 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 MAGEB5Q9BZ81 275 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM129AQ9BZQ8 928 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DDX47Q9H0S4 455 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 GPATCH2LQ9NWQ4 482 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM153AQ9UHL3 310 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 VANGL2Q9ULK5 521 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CACNA1IQ9P0X4 2223 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 KANSL1LA0AUZ9 987 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 TMEM191CA6NGB0 347 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-213ENST00000555386 F5H5T6 163 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 MAN2B1O00754 1011 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 PI15O43692 258 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CHRNA3P32297 505 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 PTPN9P43378 593 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 RPS24P62847 133 aaKnown RBP10.16□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 PPP2R5DQ14738 602 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 MPPE1Q53F39 396 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 MS4A13Q5J8X5 152 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 SEL1L2Q5TEA6 688 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 ARCQ7LC44 396 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 C14orf80Q86SX3 495 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CPNE8Q86YQ8 564 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CARNMT1Q8N4J0 409 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CCDC185Q8N715 623 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CD101Q93033 1021 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 ERLEC1Q96DZ1 483 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 PRICKLE1Q96MT3 831 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-213ENST00000555386 RPRD1AQ96P16 312 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-213ENST00000555386 XPO6Q96QU8 1125 aaKnown RBP10.16□□□□□ -0.78
PSEN1-213ENST00000555386 LTB4R2Q9NPC1 389 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 TRPV5Q9NQA5 729 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 ARHGEF4Q9NR80 690 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 HS3ST4Q9Y661 456 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 DOCK4Q8N1I0 1966 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 NUP205Q92621 2012 aa10.16□□□□□ -0.78
PSEN1-213ENST00000555386 KIAA1549LQ6ZVL6 1849 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 TYW5A2RUC4 315 aaKnown RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 ANTXRLA6NF34 631 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 GOLGA6L10A6NI86 522 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 SHISA7A6NL88 538 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 SRRM3A6NNA2 597 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 I6L893 689 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 MYO1FO00160 1098 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 HOXC11O43248 304 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 PHF2O75151 1096 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 TULP3O75386 442 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 RNF8O76064 485 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 EGFP01133 1207 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 CTNNA1P35221 906 aaKnown RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 OPRD1P41143 372 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 PEX5P50542 639 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 IRAK1P51617 712 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 STARD6P59095 220 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 DR1Q01658 176 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 GRSF1Q12849 480 aaKnown RBP eCLIP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 AUHQ13825 339 aaKnown RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 MESDQ14696 234 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 GAB4Q2WGN9 574 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 ARL13BQ3SXY8 428 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 TTMPQ5BVD1 217 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 TMEM31Q5JXX7 168 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 BRMS1LQ5PSV4 323 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 CWF19L1Q69YN2 538 aaKnown RBP10.15□□□□□ -0.78
PSEN1-213ENST00000555386 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 LRRC31Q6UY01 552 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 KDM7AQ6ZMT4 941 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 STRADAQ7RTN6 431 aa10.15□□□□□ -0.78
PSEN1-213ENST00000555386 SUGP1Q8IWZ8 645 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms