RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 OLFM2O95897 454 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 TCF4P15884 667 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 PECAM1P16284 738 aaPredicted RBP17.87■□□□□ 0.45
SHOX-204ENST00000554971 GBP2P32456 591 aaPredicted RBP17.87■□□□□ 0.45
SHOX-204ENST00000554971 PPP3CCP48454 512 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 YWHAGP61981 247 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHOX-204ENST00000554971 IL9RQ01113 521 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 ZP2Q05996 745 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 PPIL6Q8IXY8 311 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 ASB16Q96NS5 453 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 GCNAQ96QF7 691 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 TASP1Q9H6P5 420 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 SSU72Q9NP77 194 aaKnown RBP17.87■□□□□ 0.45
SHOX-204ENST00000554971 CCL26Q9Y258 94 aa17.87■□□□□ 0.45
SHOX-204ENST00000554971 EXOC1LA0A1B0GW35 172 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 SGK1O00141 431 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 PRPF4O43172 522 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHOX-204ENST00000554971 COCHO43405 550 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 TLR5O60602 858 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FBXO21O94952 628 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 PRAMEF12O95522 483 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FCARP24071 287 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 PHBP35232 272 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FAM78AQ5JUQ0 283 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 BSPRYQ5W0U4 402 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 OTOP3Q7RTS5 596 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 TRPM8Q7Z2W7 1104 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 VSIG1Q86XK7 387 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHOX-204ENST00000554971 CMTM8Q8IZV2 173 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 ARL14EPQ8N8R7 260 aaPredicted RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 RIN3Q8TB24 985 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 ZSCAN18Q8TBC5 510 aaPredicted RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 IRGQQ8WZA9 623 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FGF14Q92915 247 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 CLIC5Q9NZA1 410 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 EPS15L1Q9UBC2 864 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 KIF26AQ9ULI4 1882 aaPredicted RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 MYOFQ9NZM1 2061 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 FAM47DPA6NHR8 397 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 LOC730098B7Z3J9 87 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 STIP1P31948 543 aaKnown RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 STX2P32856 288 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 IFNAR2P48551 515 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 SNX16P57768 344 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 TRABD2AQ86V40 505 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 EDEM1Q92611 657 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 PRCCQ92733 491 aaPredicted RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 RSPRY1Q96DX4 576 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 ZFRQ96KR1 1074 aaKnown RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 FAM118BQ9BPY3 351 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 DNAJC17Q9NVM6 304 aaKnown RBP17.86■□□□□ 0.45
SHOX-204ENST00000554971 KLHL11Q9NVR0 708 aa17.86■□□□□ 0.45
SHOX-204ENST00000554971 RASA4BC9J798 803 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 GOLGA8SH3BPF8 625 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 APOC4-APOC2K7ER74 178 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 RASA4O43374 803 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 CST8O60676 142 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 GRAP2O75791 330 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 APOC2P02655 101 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 LTFP02788 710 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 PSEN1P49768 467 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 TUBP50607 506 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 ZNF143P52747 638 aaPredicted RBP17.85■□□□□ 0.45
SHOX-204ENST00000554971 ARL4CP56559 192 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 HECTD3Q5T447 861 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 FBXW10Q5XX13 1052 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 TXNRD3NBQ6F5E7 133 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 OR6B2Q6IFH4 312 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 RGS9BPQ6ZS82 235 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 ARID3BQ8IVW6 561 aaPredicted RBP17.85■□□□□ 0.45
SHOX-204ENST00000554971 ADHFE1Q8IWW8 467 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 ACTL9Q8TC94 416 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 LRRC3BQ96PB8 259 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 SLC12A4Q9UP95 1085 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 ARL2BPQ9Y2Y0 163 aa17.85■□□□□ 0.45
SHOX-204ENST00000554971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.84■□□□□ 0.45
SHOX-204ENST00000554971 CFAP73A6NFT4 308 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 TCP11X1B4DZS4 312 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 MDM4O15151 490 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 ENDOD1O94919 500 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 DDX6P26196 483 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHOX-204ENST00000554971 SLC6A3Q01959 620 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 TFDP2Q14188 446 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 HIF1AQ16665 826 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 ARHGAP15Q53QZ3 475 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 PARM1Q6UWI2 310 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 SLC26A9Q7LBE3 791 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 CYP4X1Q8N118 509 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 ZNF276Q8N554 614 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 ARFGAP1Q8N6T3 406 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 TDRD5Q8NAT2 981 aaKnown RBP17.84■□□□□ 0.45
SHOX-204ENST00000554971 KCTD6Q8NC69 237 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 RSAD2Q8WXG1 361 aa17.84■□□□□ 0.45
SHOX-204ENST00000554971 USP13Q92995 863 aaPredicted RBP17.84■□□□□ 0.45
SHOX-204ENST00000554971 PWWP2AQ96N64 755 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms