RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 SYT17Q9BSW7 474 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 PCMTD2Q9NV79 361 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 TMEM216Q9P0N5 145 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 CDH9Q9ULB4 789 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 MEIS3P2A8K0S8 358 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 ZNF623O75123 536 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 ERCC2P18074 760 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 DNAJB2P25686 324 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 CSE1LP55060 971 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 SARNPP82979 210 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 C17orf99Q6UX52 265 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 GALNT7Q86SF2 657 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 TEKT5Q96M29 485 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 GPR22Q99680 433 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 MAGEB16A2A368 324 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 PAX3P23760 479 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 LHX1P48742 406 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 HK2P52789 917 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 KPNB1Q14974 876 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 NUDCD3Q8IVD9 361 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 KBTBD2Q8IY47 623 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 PLD6Q8N2A8 252 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 CNTD1Q8N815 330 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
PPP4R3A-206ENST00000554943 CHRNA1P02708 482 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 GABRB3P28472 473 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 RPL9P32969 192 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARL4AP40617 200 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC1A6P48664 564 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CPT1AP50416 773 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 AQP5P55064 265 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 DCLRE1AQ6PJP8 1040 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 GATA6Q92908 595 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 PIN4Q9Y237 131 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CENPFP49454 3210 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 PLXNA4Q9HCM2 1894 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 MPOP05164 745 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 DESP17661 470 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 NPY2RP49146 381 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CREB5Q02930 508 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC34A1Q06495 639 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 STX3Q13277 289 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 NAA25Q14CX7 972 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 C10orf107Q8IVU9 208 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ACTRT2Q8TDY3 377 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 MAELQ96JY0 434 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 COLEC11Q9BWP8 271 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC7A8Q9UHI5 535 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 STAP1Q9ULZ2 295 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SCN8AQ9UQD0 1980 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC22A2O15244 555 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ZBTB24O43167 697 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 MTSS1O43312 755 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 HUS1O60921 280 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CRABP2P29373 138 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ERFP50548 548 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 TKTL1P51854 596 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 CRADDP78560 199 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 DCAF6Q58WW2 860 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ACVR1CQ8NER5 493 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 DNAH12Q6ZR08 3092 aa12.89□□□□□ -0.35
PPP4R3A-206ENST00000554943 MYBPHLA2RUH7 354 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 PRR5-ARHGAP8B1AHC4 643 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 M0QYT0 321 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 CTGFP29279 349 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARHGAP8P85298 464 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 OLIG2Q13516 323 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARID3BQ8IVW6 561 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms