RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 COQ8BQ96D53 544 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 KTI12Q96EK9 354 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-213ENST00000554776 FCRL5Q96RD9 977 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 CLPBQ9H078 707 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 TMX4Q9H1E5 349 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-213ENST00000554776 ZHX3Q9H4I2 956 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 IL21RQ9HBE5 538 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 NOD2Q9HC29 1040 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 BAG5Q9UL15 447 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 HSF4Q9ULV5 492 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 B3GNT3Q9Y2A9 372 aa3.46□□□□□ -1.86
SCFD1-213ENST00000554776 SPATA31A5Q5VU36 1347 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SPATA31A7Q8IWB4 1347 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TTC34A8MYJ7 566 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 INPPL1O15357 1258 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 PLAUP00749 431 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TFRCP02786 760 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SLC3A2P08195 630 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 CYP3A4P08684 503 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 CNPP09543 421 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 IFIT1P09914 478 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 RFPL3SP0C7P2 107 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 CHN1P15882 459 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TACR3P29371 465 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 HOXA7P31268 230 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ELF1P32519 619 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 PTGER1P34995 402 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 MMP13P45452 471 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SOX2P48431 317 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 VPS41P49754 854 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 KRTAP10-11P60412 298 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 GHRHRQ02643 423 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 EFR3AQ14156 821 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 DCTN1Q14203 1278 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ANKRD1Q15327 319 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 CTXN3Q4LDR2 81 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 UBAP2Q5T6F2 1119 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 MAP3K21Q5TCX8 1036 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ANO7Q6IWH7 933 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 WDR93Q6P2C0 686 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ZNF474Q6S9Z5 364 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 DEF8Q6ZN54 512 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 RBM44Q6ZP01 1051 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 C16orf71Q8IYS4 520 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TCP11L2Q8N4U5 519 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 PCYOX1LQ8NBM8 494 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 PRSS3P2Q8NHM4 247 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ST8SIA4Q92187 359 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 KCNJ9Q92806 393 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 CELF1Q92879 486 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ZUFSPQ96AP4 578 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SIGLEC11Q96RL6 698 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SENP7Q9BQF6 1050 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TMEM79Q9BSE2 394 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SPRTNQ9H040 489 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 PAIP1Q9H074 479 aaKnown RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ACAD9Q9H845 621 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 ARL8BQ9NVJ2 186 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 TERF2IPQ9NYB0 399 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 SLC13A4Q9UKG4 626 aa3.45□□□□□ -1.86
SCFD1-213ENST00000554776 HEMK1Q9Y5R4 338 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-213ENST00000554776 MBD3L5A6NJ08 208 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 GRM8O00222 908 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 PEX12O00623 359 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 PPEF2O14830 753 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 EIF5BO60841 1220 aaKnown RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 TBX18O95935 607 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 RPS6KB1P23443 525 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 HOXD9P28356 352 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 GGT5P36269 586 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 SLC37A1P57057 533 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 SHC2P98077 582 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 HSF1Q00613 529 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 GALNT2Q10471 571 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 TBRG1Q3YBR2 411 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 GPATCH4Q5T3I0 446 aaKnown RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 FAAH2Q6GMR7 532 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 CLEC4GQ6UXB4 293 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 SLC39A5Q6ZMH5 540 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 C1orf122Q6ZSJ8 110 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 BBS12Q6ZW61 710 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 UBE2Q1Q7Z7E8 422 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 ADGRF3Q8IZF5 1079 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 ANKRD44Q8N8A2 993 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 EXD3Q8N9H8 876 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 C16orf52Q8NHV5 167 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 KCNG4Q8TDN1 519 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 WIPF2Q8TF74 440 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 UCMAQ8WVF2 138 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 CUL5Q93034 780 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 ZNF48Q96MX3 618 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 GPR78Q96P69 363 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 PIGSQ96S52 555 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 TTYH1Q9H313 450 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 PDE11AQ9HCR9 933 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 IRAK4Q9NWZ3 460 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 TRNAU1APQ9NX07 287 aaKnown RBP3.44□□□□□ -1.86
SCFD1-213ENST00000554776 PI4KBQ9UBF8 816 aa3.44□□□□□ -1.86
SCFD1-213ENST00000554776 AFG3L2Q9Y4W6 797 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms