RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 VPS52Q8N1B4 723 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 TMEM57Q8N5G2 664 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 C16orf52Q8NHV5 167 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 PIGOQ8TEQ8 1089 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 WIPF2Q8TF74 440 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 IP6K1Q92551 441 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 EVI5LQ96CN4 794 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 COQ8BQ96D53 544 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 KTI12Q96EK9 354 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 ZNF778Q96MU6 729 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 PIMREGQ9BSJ6 248 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 RMI1Q9H9A7 625 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 ARL15Q9NXU5 204 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 TERF2IPQ9NYB0 399 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 UTS2RQ9UKP6 389 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 GPR52Q9Y2T5 361 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 DERAQ9Y315 318 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 CXorf65A6NEN9 183 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 PRPF4O43172 522 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 MSI1O43347 362 aaKnown RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 LYL1P12980 280 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 PKMP14618 531 aaKnown RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 HOXB9P17482 250 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 PPM1FP49593 454 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 OAZ1P54368 228 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 PPFIA1Q13136 1202 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 GALNT3Q14435 633 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 RBMS2Q15434 407 aaKnown RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 MIDNQ504T8 468 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 ZNF484Q5JVG2 852 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 KIAA1755Q5JYT7 1200 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 MTFR2Q6P444 385 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 SLC30A9Q6PML9 568 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 CYB5R4Q7L1T6 521 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 KLBQ86Z14 1044 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-211ENST00000554437 AAMDCQ9H7C9 122 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 RNF7Q9UBF6 113 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 LAMP3Q9UQV4 416 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 DTX4Q9Y2E6 619 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 PKP3Q9Y446 797 aa5.58□□□□□ -1.52
SCFD1-211ENST00000554437 ZNF335Q9H4Z2 1342 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 SETD1BQ9UPS6 1966 aaKnown RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 NPIPB13A6NJU9 1138 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 NPIPB5A8MRT5 1133 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 KCNJ18B7U540 433 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 NPIPB4C9JG80 1138 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 RHODO00212 210 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 CNOT3O75175 753 aaKnown RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 CSF1P09603 554 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 ACP5P13686 325 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 PAX3P23760 479 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 GSTM2P28161 218 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 STAT1P42224 750 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 PAPOLAP51003 745 aaKnown RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 PLCD1P51178 756 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 ANKRD18AQ8IVF6 992 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 SLC44A5Q8NCS7 719 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 CEP70Q8NHQ1 597 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 FAM110DQ8TAY7 271 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 KAT2AQ92830 837 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 RBM17Q96I25 401 aaKnown RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 COG8Q96MW5 612 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 KLQ9UEF7 1012 aa5.57□□□□□ -1.52
SCFD1-211ENST00000554437 RRP7AQ9Y3A4 280 aaKnown RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-211ENST00000554437 TRBV5-3A0A0A0MS03 114 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 KIR2DS5A0A0G2JLQ3 304 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 STX16-NPEPL1H3BU86 382 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 KIR2DS3K7RE56 304 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 STX16O14662 325 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 PPEF2O14830 753 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 SYN3O14994 580 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 WNT1P04628 370 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 PRF1P14222 555 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 PNPLA4P41247 253 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 BIRC3Q13489 604 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 MTX1Q13505 466 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 DLGAP5Q15398 846 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 RUNDC3AQ59EK9 446 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 ISM2Q6H9L7 571 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 C11orf87Q6NUJ2 197 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 B4GALNT4Q76KP1 1039 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 RNF144BQ7Z419 303 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 MRPL10Q7Z7H8 261 aaKnown RBP5.56□□□□□ -1.52
SCFD1-211ENST00000554437 ZNF354CQ86Y25 554 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 HERC6Q8IVU3 1022 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 SCN4BQ8IWT1 228 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 MYRIPQ8NFW9 859 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 LINS1Q8NG48 757 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 SMG7Q92540 1137 aaKnown RBP5.56□□□□□ -1.52
SCFD1-211ENST00000554437 PYM1Q9BRP8 204 aaKnown RBP5.56□□□□□ -1.52
SCFD1-211ENST00000554437 HERC2P3Q9BVR0 1158 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 C1QTNF7Q9BXJ2 289 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 THSD1Q9NS62 852 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 SLC22A11Q9NSA0 550 aa5.56□□□□□ -1.52
SCFD1-211ENST00000554437 THAP1Q9NVV9 213 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms