RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 DSELQ8IZU8 1212 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 FBXL6Q8N531 539 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 FBXO36Q8NEA4 188 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 LMO3Q8TAP4 145 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 FNIP1Q8TF40 1166 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 AFG1LQ8WV93 481 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 SLC39A13Q96H72 371 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ADPRHL2Q9NX46 363 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 PKD2L2Q9NZM6 624 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ATPIF1Q9UII2 106 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 PCDHB13Q9Y5F0 798 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 A0A0X1KG70 313 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 TRIM49D1C9J1S8 452 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 CLIC2O15247 247 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 GAS7O60861 476 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 CSPG5O95196 566 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 SGPL1O95470 568 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 NTRK1P04629 796 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 ME2P23368 584 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 CD40LGP29965 261 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 WEE1P30291 646 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 QARSP47897 775 aaKnown RBP9.74□□□□□ -0.85
SIX4-202ENST00000554079 NUMBP49757 651 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 PKNOX1P55347 436 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 NME5P56597 212 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 FMO1Q01740 532 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 SNX17Q15036 470 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 BBS9Q3SYG4 887 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 PXDC1Q5TGL8 231 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 ANKRD22Q5VYY1 191 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 KCNT2Q6UVM3 1135 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 CYP20A1Q6UW02 462 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 LDHAL6AQ6ZMR3 332 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 ATG14Q6ZNE5 492 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 KRT28Q7Z3Y7 464 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 JPH3Q8WXH2 748 aaPredicted RBP9.74□□□□□ -0.85
SIX4-202ENST00000554079 GLMNQ92990 594 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 SLCO4A1Q96BD0 722 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 MTG1Q9BT17 334 aaPredicted RBP9.74□□□□□ -0.85
SIX4-202ENST00000554079 ISCA1Q9BUE6 129 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 SLA2Q9H6Q3 261 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 FBXO8Q9NRD0 319 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 IL20Q9NYY1 176 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 MTRRQ9UBK8 725 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 NOSIPQ9Y314 301 aaKnown RBP9.74□□□□□ -0.85
SIX4-202ENST00000554079 SNCAIPQ9Y6H5 919 aa9.74□□□□□ -0.85
SIX4-202ENST00000554079 SLC9A3R1O14745 358 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 DCXO43602 365 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GH2P01242 217 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ATF7P17544 494 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 CCNCP24863 283 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GRIK1P39086 918 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ATXN3P54252 364 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 NAPAP54920 295 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC12A3P55017 1021 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 MYL7Q01449 175 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC10A2Q12908 348 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 TRIM32Q13049 653 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 BFSP2Q13515 415 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TAF5Q15542 800 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 MAPK11Q15759 364 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 AASDHQ4L235 1098 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 ANGEL2Q5VTE6 544 aaKnown RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 MBLAC2Q68D91 279 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC9A4Q6AI14 798 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 POLNQ7Z5Q5 900 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CAND1Q86VP6 1230 aaKnown RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 RHPN2Q8IUC4 686 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ARHGEF19Q8IW93 802 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 BRSK2Q8IWQ3 736 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TPH2Q8IWU9 490 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 AFAP1L2Q8N4X5 818 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ANKFN1Q8N957 763 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 BTN2A3PQ96KV6 586 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GDF15Q99988 308 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TMEM246Q9BRR3 403 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TRPV6Q9H1D0 765 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 DGKBQ9Y6T7 804 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TEX51A0A1B0GUA7 166 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FAM25EA8MYX2 175 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 AIM2O14862 343 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 TGFB1I1O43294 461 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SGTAO43765 313 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 DEAF1O75398 565 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 RFPL1O75677 317 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 GSRP00390 522 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 C1QAP02745 245 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 KRT8P05787 483 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 CAPN1P07384 714 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 INHBAP08476 426 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 FGF3P11487 239 aaPredicted RBP9.73□□□□□ -0.85
SIX4-202ENST00000554079 BMP3P12645 472 aa9.73□□□□□ -0.85
SIX4-202ENST00000554079 SPNP16150 400 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms