RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 MPP7Q5T2T1 576 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 DHRS13Q6UX07 377 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 USP30Q70CQ3 517 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 MMAAQ8IVH4 418 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 PPM1KQ8N3J5 372 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 CLEC4CQ8WTT0 213 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 FAM149B1Q96BN6 582 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 SLC6A18Q96N87 628 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 SERPINB11Q96P15 392 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 NT5C1BQ96P26 610 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 NAA15Q9BXJ9 866 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 PABPC3Q9H361 631 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 OSGEPQ9NPF4 335 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ST7Q9NRC1 585 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 SCML1Q9UN30 329 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ADAMTS20P59510 1910 aa9.15□□□□□ -0.95
TDP1-208ENST00000553989 ZZEF1O43149 2961 aa9.15□□□□□ -0.95
TDP1-208ENST00000553989 MUC22E2RYF6 1773 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 NUMA1Q14980 2115 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 A0A1W2PPC4 97 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 TRIM49BA6NDI0 452 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 CAPN9O14815 690 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 MID1O15344 667 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 SIN3BO75182 1162 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 FBXO21O94952 628 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 APOEP02649 317 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 ASLP04424 464 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 PAEPP09466 180 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 BRD2P25440 801 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 HNF1BP35680 557 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 PRCPP42785 496 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 CTSKP43235 329 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 RPS24P62847 133 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 CETN1Q12798 172 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 STIM1Q13586 685 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 MORC3Q14149 939 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 CST6Q15828 149 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 HNRNPA1L2Q32P51 320 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 FILIP1LQ4L180 1135 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 FAM133BQ5BKY9 247 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 KCNT1Q5JUK3 1230 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 PRAMEF14Q5SWL7 426 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 ZNF658Q5TYW1 1059 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 E4F1Q66K89 784 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 ANKRD40Q6AI12 368 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 PMF1Q6P1K2 205 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 MSANTD2Q6P1R3 559 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 NCEH1Q6PIU2 408 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 LCLAT1Q6UWP7 414 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 DBX2Q6ZNG2 339 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 GATAD2AQ86YP4 633 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 CREBRFQ8IUR6 639 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 SCML4Q8N228 414 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 SPATA20Q8TB22 786 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 IRGQQ8WZA9 623 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 TFAP2BQ92481 460 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 CNDP2Q96KP4 475 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 PRICKLE1Q96MT3 831 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 GSDMAQ96QA5 445 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 RSPH9Q9H1X1 276 aaPredicted RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 FANCLQ9NW38 375 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 TRMT1Q9NXH9 659 aaKnown RBP9.14□□□□□ -0.95
TDP1-208ENST00000553989 TJP2Q9UDY2 1190 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 SERGEFQ9UGK8 458 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 COQ4Q9Y3A0 265 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
TDP1-208ENST00000553989 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 A0A1B0GTQ1 180 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 EDDM13A0A1B0GTR0 161 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 TTC34A8MYJ7 566 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ENC1O14682 589 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 VILLO15195 856 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 LUC7L3O95232 432 aaKnown RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 LDOC1O95751 146 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 IGLV3-27P01718 113 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 JUPP14923 745 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 CD38P28907 300 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 NNMTP40261 264 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ABCG1P45844 678 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 FMO5P49326 533 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 ARRB1P49407 418 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 NUMBP49757 651 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 GALCP54803 685 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 LRRC63Q05C16 580 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 TBX2Q13207 712 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 ARID5BQ14865 1188 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 NR1I3Q14994 352 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 STILQ15468 1287 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SMAD1Q15797 465 aaKnown RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
TDP1-208ENST00000553989 SOWAHCQ53LP3 525 aaPredicted RBP9.13□□□□□ -0.95
TDP1-208ENST00000553989 PITRM1Q5JRX3 1037 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms