RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZNF135P52742 658 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-208ENST00000553868 CDH6P55285 790 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 MTA1Q13330 715 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 NNTQ13423 1086 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 CCINQ13939 588 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 EFHC2Q5JST6 749 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 DGKKQ5KSL6 1271 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 BRMS1LQ5PSV4 323 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 TXNRD3NBQ6F5E7 133 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 TAC4Q86UU9 113 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 FAM131BQ86XD5 332 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 LURAP1LQ8IV03 231 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 ABCA7Q8IZY2 2146 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 CSGALNACT1Q8TDX6 532 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 SMARCD2Q92925 531 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 RNF34Q969K3 372 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 PSMG2Q969U7 264 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 RUNDC3BQ96NL0 473 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 PEBP4Q96S96 227 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 SNRNP25Q9BV90 132 aaKnown RBP14.94□□□□□ -0.02
SHMT2-208ENST00000553868 PRDM16Q9HAZ2 1276 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 NMUR1Q9HB89 426 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 AP4E1Q9UPM8 1137 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 APC2O95996 2303 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 ACACAQ13085 2346 aa14.94□□□□□ -0.02
SHMT2-208ENST00000553868 KALRNO60229 2985 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 SYNJ2BP-COX16A0A087WUM0 186 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 HEPACAM2A8MVW5 462 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 IRAK2O43187 625 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 IGLV3-25P01717 112 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 ZDHHC11BP0C7U3 371 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 CTHP32929 405 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 CDKN2BP42772 138 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 CXCR3P49682 368 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 SIM1P81133 766 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 TFDP2Q14188 446 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 DPYSL2Q16555 572 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 KCNT1Q5JUK3 1230 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 TEX35Q5T0J7 233 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 OTUD1Q5VV17 481 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 DNAJB7Q7Z6W7 309 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 MMGT1Q8N4V1 131 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 RAPGEF5Q92565 580 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 ZNF670Q9BS34 389 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 CALN1Q9BXU9 219 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 MAK16Q9BXY0 300 aaKnown RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 DHX35Q9H5Z1 703 aaKnown RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 WDCPQ9H6R7 721 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 KLHL11Q9NVR0 708 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 COX16Q9P0S2 106 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 RCOR3Q9P2K3 495 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 FZD10Q9ULW2 581 aa14.93□□□□□ -0.02
SHMT2-208ENST00000553868 KIF26AQ9ULI4 1882 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-208ENST00000553868 hCG_1818297A0A087WSY0 165 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 MOSPD3O75425 235 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 FGF19O95750 216 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 HMGA1P17096 107 aaKnown RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 CCR1P32246 355 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ADRA1BP35368 520 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ARL4AP40617 200 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 TUBP50607 506 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 IRX4P78413 519 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 C2orf54Q08AI8 447 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 TAZQ16635 292 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 C10orf120Q5SQS8 335 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ACBD5Q5T8D3 534 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 CYP4V2Q6ZWL3 525 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 MFSD6LQ8IWD5 586 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 HS6ST3Q8IZP7 471 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 TTC13Q8NBP0 860 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ZSCAN18Q8TBC5 510 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 DEPDC1BQ8WUY9 529 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 CRELD1Q96HD1 420 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ZFYVE19Q96K21 471 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 GCNAQ96QF7 691 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 AP1M1Q9BXS5 423 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 FRMD8P1Q9BZ68 369 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 SLITRK6Q9H5Y7 841 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHMT2-208ENST00000553868 GTSE1Q9NYZ3 720 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 SMARCAL1Q9NZC9 954 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 SLC12A6Q9UHW9 1150 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 TLR6Q9Y2C9 796 aa14.92□□□□□ -0.02
SHMT2-208ENST00000553868 ZNF840PA6NDX5 716 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 C3orf70A6NLC5 250 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-208ENST00000553868 H3BRJ5 948 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 KHNYNO15037 678 aaKnown RBP14.91□□□□□ -0.02
SHMT2-208ENST00000553868 TLR5O60602 858 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 C1QL1O75973 258 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 APOEP02649 317 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms