RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SLC22A12	Q96S37	553 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	LSM14B	Q9BX40	385 aa	Known RBP	6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	UBXN6	Q9BZV1	441 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	ACP6	Q9NPH0	428 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	SLC2A4RG	Q9NR83	387 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	FAM207A	Q9NSI2	230 aa	Predicted RBP	6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	OBP2A	Q9NY56	170 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	TRPM5	Q9NZQ8	1165 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	HESX1	Q9UBX0	185 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	SCML2	Q9UQR0	700 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	CCL26	Q9Y258	94 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	DAAM1	Q9Y4D1	1078 aa		6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	NYNRIN	Q9P2P1	1898 aa	Known RBP	6.98	□□□□□ -1.29
CNOT2-238	ENST00000552422	EML5	Q05BV3	1969 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	TRAV19	A0A0A6YYK7	116 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	SLC22A31	A6NKX4	558 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	HEPACAM2	A8MVW5	462 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422		M0QYV0	167 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ARNTL	O00327	626 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	FOXN3	O00409	490 aa	Predicted RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	RGS13	O14921	159 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	THAP12	O43422	761 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	MED7	O43513	233 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	NARS	O43776	548 aa	Known RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	CALCA	P01258	141 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	CKM	P06732	381 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	PNMA6A	P0CW24	399 aa	Predicted RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	USP8	P40818	1118 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	VIPR2	P41587	438 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	RPL34	P49207	117 aa	Known RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	PGF	P49763	221 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	SLC7A9	P82251	487 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	SIGLEC14	Q08ET2	396 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ADIG	Q0VDE8	80 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	RAPGEF1	Q13905	1077 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ZNF268	Q14587	947 aa	Predicted RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	DRAP1	Q14919	205 aa	Predicted RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	PRR23B	Q6ZRT6	265 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	MFSD6L	Q8IWD5	586 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	CELF5	Q8N6W0	485 aa	Known RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	DEPDC1B	Q8WUY9	529 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	SLC35F5	Q8WV83	523 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ZNF606	Q8WXB4	792 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	KCTD13	Q8WZ19	329 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	USP13	Q92995	863 aa	Predicted RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	SECISBP2L	Q93073	1101 aa	Known RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	LRRC3B	Q96PB8	259 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	DIRC2	Q96SL1	478 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	STK33	Q9BYT3	514 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	PLA2G2F	Q9BZM2	168 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	EPHX3	Q9H6B9	360 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	KIF9	Q9HAQ2	790 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	TRPC7	Q9HCX4	862 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	TLR8	Q9NR97	1041 aa	Known RBP	6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	TDP1	Q9NUW8	608 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	GMIP	Q9P107	970 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ADAMTS1	Q9UHI8	967 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	ARHGAP26	Q9UNA1	814 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422	CHD5	Q8TDI0	1954 aa		6.97	□□□□□ -1.29
CNOT2-238	ENST00000552422		A0A1W2PQC6	194 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	GOLGA6L19	H0YKK7	550 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TEX33	O43247	280 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	COCH	O43405	550 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TLR5	O60602	858 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ATE1	O95260	518 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TCF3	P15923	654 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	HDC	P19113	662 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	GPD2	P43304	727 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TKTL1	P51854	596 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	BPIFB4	P59827	614 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ZNF445	P59923	1031 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	POLR2F	P61218	127 aa	Known RBP	6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TPM4	P67936	248 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	GPC5	P78333	572 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ZXDB	P98169	803 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ZNF77	Q15935	545 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	HECTD3	Q5T447	861 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	PM20D1	Q6GTS8	502 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	PMF1	Q6P1K2	205 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	KLHDC10	Q6PID8	442 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	BHLHA9	Q7RTU4	235 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	SLC47A2	Q86VL8	602 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	SCML4	Q8N228	414 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ZNF276	Q8N554	614 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	ARL14EP	Q8N8R7	260 aa	Predicted RBP	6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	NEK11	Q8NG66	645 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	UBA3	Q8TBC4	463 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	DNASE1L2	Q92874	299 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	CYP2S1	Q96SQ9	504 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TRMT61B	Q9BVS5	477 aa	Known RBP	6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	C1QTNF1	Q9BXJ1	281 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	RNF38	Q9H0F5	515 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TSPY26P	Q9H489	355 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	CCSER2	Q9H7U1	834 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	NLRC4	Q9NPP4	1024 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	TRPV5	Q9NQA5	729 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	OSER1	Q9NX31	292 aa		6.96	□□□□□ -1.3
CNOT2-238	ENST00000552422	CLIC5	Q9NZA1	410 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms