RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 TPMTP51580 245 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 COPAP53621 1224 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 AIF1P55008 147 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 ZNF33AQ06730 810 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 PTP4A2Q12974 167 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 CCDC14Q49A88 953 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 ZNF783Q6ZMS7 281 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 ARMCX6Q7L4S7 300 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 BNIPLQ7Z465 357 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 CADM4Q8NFZ8 388 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 MCEEQ96PE7 176 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 NCAPGQ9BPX3 1015 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 HAUS4Q9H6D7 363 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 PRSS16Q9NQE7 514 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 INTS6Q9UL03 887 aaKnown RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 TBC1D30Q9Y2I9 924 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 SCINQ9Y6U3 715 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 EML5Q05BV3 1969 aa13.7□□□□□ -0.22
CEP290-205ENST00000550962 MYO18AQ92614 2054 aaKnown RBP13.7□□□□□ -0.22
CEP290-205ENST00000550962 PLXND1Q9Y4D7 1925 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 IGLV3-19P01714 112 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 RFC1P35251 1148 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 ADRA1BP35368 520 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 GGCXP38435 758 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 ZNF143P52747 638 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 LIMK1P53667 647 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 ZBED6P86452 979 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 FOXK2Q01167 660 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 NRG1Q02297 640 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 TRIM14Q14142 442 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 ELAVL3Q14576 367 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 SF3A2Q15428 464 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 C15orf59Q2T9L4 293 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 EFHC2Q5JST6 749 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 CXorf57Q6NSI4 855 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 CACUL1Q86Y37 369 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 APCDD1Q8J025 514 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 GANCQ8TET4 914 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 NTAN1Q96AB6 310 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 FEM1AQ9BSK4 669 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 OSBPL2Q9H1P3 480 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 SLC6A17Q9H1V8 727 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 SGK2Q9HBY8 427 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 DLL3Q9NYJ7 618 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 OR12D3Q9UGF7 316 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 LUC7L2Q9Y383 392 aaKnown RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
CEP290-205ENST00000550962 GVINP1Q7Z2Y8 2422 aa13.69□□□□□ -0.22
CEP290-205ENST00000550962 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 TMCO5BA8MYB1 307 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 SIN3BO75182 1162 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 RTN2O75298 545 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 ADH1BP00325 375 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 SERPING1P05155 500 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 MZF1P28698 734 aaPredicted RBP13.68□□□□□ -0.22
CEP290-205ENST00000550962 PTGER3P43115 390 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 CLCN6P51797 869 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
CEP290-205ENST00000550962 ATXN1P54253 815 aaKnown RBP13.68□□□□□ -0.22
CEP290-205ENST00000550962 CCDC6Q16204 474 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 DUOXA1Q1HG43 343 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
CEP290-205ENST00000550962 ACCSLQ4AC99 568 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 TRIM61Q5EBN2 209 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 TRNP1Q6NT89 227 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 RETSATQ6NUM9 610 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 RWDD4Q6NW29 188 aaKnown RBP13.68□□□□□ -0.22
CEP290-205ENST00000550962 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 WDR59Q6PJI9 974 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 USP30Q70CQ3 517 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 DGLUCYQ7Z3D6 616 aa13.68□□□□□ -0.22
CEP290-205ENST00000550962 SLFN11Q7Z7L1 901 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms