RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PIK3R6Q5UE93 754 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 CHSY1Q86X52 802 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 ZNF683Q8IZ20 524 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 RIBC1Q8N443 379 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-217ENST00000550483 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 KREMEN2Q8NCW0 462 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 LGMNQ99538 433 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
CACNB3-217ENST00000550483 MAGEB5Q9BZ81 275 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 FETUBQ9UGM5 382 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
CACNB3-217ENST00000550483 A0A087WUV0 522 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 COCHO43405 550 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 F11P03951 625 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 VAV1P15498 845 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 TACR2P21452 398 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 CHKAP35790 457 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 ETFBP38117 255 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 CCDC85BQ15834 202 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 CCDC38Q502W7 563 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 NLRP14Q86W24 1093 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 CCDC110Q8TBZ0 833 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 POF1BQ8WVV4 589 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 AUTS2Q8WXX7 1259 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 PGM2Q96G03 612 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 RPRD1AQ96P16 312 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 NAT9Q9BTE0 207 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 KLHL8Q9P2G9 620 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
CACNB3-217ENST00000550483 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
CACNB3-217ENST00000550483 TYW5A2RUC4 315 aaKnown RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 MATN3O15232 486 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 RNF40O75150 1001 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 XYLBO75191 536 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 CLDN11O75508 207 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 TBX18O95935 607 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 PTPN3P26045 913 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 IFNAR2P48551 515 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 LMAN1P49257 510 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 CDH4P55283 916 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ERVK-21P61565 698 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 WASHC5Q12768 1159 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 RASA2Q15283 850 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 TEX44Q53QW1 395 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF783Q6ZMS7 281 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 CHST9Q7L1S5 443 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 PID1Q7Z2X4 250 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 NPWQ8N729 165 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 PYROXD1Q8WU10 500 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 NECAB3Q96P71 396 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ASB2Q96Q27 587 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 KLF16Q9BXK1 252 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 IL21Q9HBE4 155 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 ETNK1Q9HBU6 452 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
CACNB3-217ENST00000550483 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
CACNB3-217ENST00000550483 TRAV19A0A0A6YYK7 116 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 H3BQF6 201 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 RAMP2O60895 175 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 STC2O76061 302 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 TMEM63AO94886 807 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 APRTP07741 180 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 MBL2P11226 248 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-217ENST00000550483 RENBPP51606 427 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 CLCN4P51793 760 aa12.87□□□□□ -0.35
CACNB3-217ENST00000550483 EPHA5P54756 1037 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms