RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PLK1P53350 603 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 CDH18Q13634 790 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 KRT81Q14533 505 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PDK2Q15119 407 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 FUT11Q495W5 492 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 ANKRD20A8PQ5CZ79 823 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 MEI1Q5TIA1 1274 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 RNF219Q5W0B1 726 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 C1orf228Q6PIY5 440 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 SETD3Q86TU7 594 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 TP53INP2Q8IXH6 220 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 KATNAL2Q8IYT4 538 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 SYCE1Q8N0S2 351 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PCDH19Q8TAB3 1148 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 RNF25Q96BH1 459 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PSMB7Q99436 277 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 FEM1AQ9BSK4 669 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 RETREG1Q9H6L5 497 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 DDX56Q9NY93 547 aaKnown RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 TTC28Q96AY4 2481 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 A0A0D9SEW6 157 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ILVBLA1L0T0 632 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 TBC1D3BA6NDS4 549 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-206ENST00000550406 KRT1P04264 644 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 DRD1P21728 446 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 OR1E1P30953 314 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ACVRL1P37023 503 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ARL4AP40617 200 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 CDKN2BP42772 138 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 TNFRSF4P43489 277 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 MAPKAPK2P49137 400 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ADCY2Q08462 1091 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 GAS6Q14393 721 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 UBXN2BQ14CS0 331 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 AFMIDQ63HM1 303 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ARHGAP12Q8IWW6 846 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
RAB5C-206ENST00000550406 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 UMODL1-AS1Q8N2C9 162 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 NPWQ8N729 165 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 OR7D4Q8NG98 312 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 SORCS1Q8WY21 1168 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 TTC17Q96AE7 1141 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 CLDN23Q96B33 292 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 RNF157Q96PX1 679 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 NELL2Q99435 816 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF670Q9BS34 389 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 OSBPL6Q9BZF3 934 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 SLC39A8Q9C0K1 460 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 CATSPERBQ9H7T0 1116 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 ZDHHC4Q9NPG8 344 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 RCOR3Q9P2K3 495 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-206ENST00000550406 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 KMT2EQ8IZD2 1858 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
RAB5C-206ENST00000550406 A0A0C4DFX4 3053 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 CCDC66A2RUB6 948 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 RHOCP08134 193 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 PYGMP11217 842 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 GLDCP23378 1020 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 KIR2DL1P43626 348 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 GNA12Q03113 381 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 GRSF1Q12849 480 aaKnown RBP eCLIP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 SLC12A1Q13621 1099 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 LLGL1Q15334 1064 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 ZFYVE27Q5T4F4 411 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 MBLAC2Q68D91 279 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 RCOR2Q8IZ40 523 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 WFIKKN2Q8TEU8 576 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 ARHGEF2Q92974 986 aaKnown RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 TLR10Q9BXR5 811 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 ACE2Q9BYF1 805 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 ELOVL2Q9NXB9 296 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 DLGAP2Q9P1A6 1054 aa13.38□□□□□ -0.27
RAB5C-206ENST00000550406 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
RAB5C-206ENST00000550406 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms