RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 RAPGEF1Q13905 1077 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 C5orf22Q49AR2 442 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC45A4Q5BKX6 768 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 TCP11X2Q5H9J9 407 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 MIIPQ5JXC2 388 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 UNQ6494/PRO21346Q6UXR6 183 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 LRRC31Q6UY01 552 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 DBX2Q6ZNG2 339 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 ARCQ7LC44 396 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 ADAT2Q7Z6V5 191 aaKnown RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 GLRX5Q86SX6 157 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF677Q86XU0 584 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 MMAAQ8IVH4 418 aaKnown RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 APCDD1Q8J025 514 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 KDF1Q8NAX2 398 aaPredicted RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 PTPRN2Q92932 1015 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 MYEOVQ96EZ4 313 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 PGAP3Q96FM1 320 aaPredicted RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SCNM1Q9BWG6 230 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 PLCB1Q9NQ66 1216 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 COX16Q9P0S2 106 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLCO3A1Q9UIG8 710 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC25A13Q9UJS0 675 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 APOBEC2Q9Y235 224 aaKnown RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 TBC1D30Q9Y2I9 924 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 CACNA1EQ15878 2313 aa11.21□□□□□ -0.62
VTI1BP3-201ENST00000550220 A0A1B0GVT2 93 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 A0A1W2PPC4 97 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 ALOX15BO15296 676 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 MID1O15344 667 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 SLC7A4O43246 635 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 PAGE1O75459 146 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 CXCR3P49682 368 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 CCR5P51681 352 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 GALCP54803 685 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 C21orf59P57076 290 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 KIF19Q2TAC6 998 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 INAVAQ3KP66 663 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 SLC25A52Q3SY17 297 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 PTPN20Q4JDL3 420 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 FKBP15Q5T1M5 1219 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 MMS22LQ6ZRQ5 1243 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 SETD3Q86TU7 594 aaPredicted RBP11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 ANKRD20A12PQ8NF67 263 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 SETD7Q8WTS6 366 aaKnown RBP11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 OR8D1Q8WZ84 308 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 IGSF8Q969P0 613 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 NT5C3BQ969T7 300 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 CCDC114Q96M63 670 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 FAM129BQ96TA1 746 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 NPY6RQ99463 290 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 FEM1AQ9BSK4 669 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 NAA15Q9BXJ9 866 aaKnown RBP11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 ACE2Q9BYF1 805 aaPredicted RBP11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 RETREG1Q9H6L5 497 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 TM9SF3Q9HD45 589 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 ARHGEF38Q9NXL2 777 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 ANKRD6Q9Y2G4 727 aa11.2□□□□□ -0.62
VTI1BP3-201ENST00000550220 A0A1W2PP55 124 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 FAM47DPA6NHR8 397 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 GOLGA6L22H0YM25 854 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 VILLO15195 856 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 ATP9BO43861 1147 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 PCDHGA12O60330 932 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 IL1BP01584 269 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 CTSOP43234 321 aaPredicted RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 RNASE9P60153 205 aaKnown RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 PITX1P78337 314 aaPredicted RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 ACCSLQ4AC99 568 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 DPY19L2P1Q6NXN4 242 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 RHBDD1Q8TEB9 315 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 ADAMTS14Q8WXS8 1223 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 RPL10LQ96L21 214 aaKnown RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 HAPLN3Q96S86 360 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 C2orf49Q9BVC5 232 aaPredicted RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 TKTL2Q9H0I9 626 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 MUC3BQ9H195 1237 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 MTG2Q9H4K7 406 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 SAMSN1Q9NSI8 373 aaKnown RBP11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 VPS28Q9UK41 221 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 PCOLCE2Q9UKZ9 415 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 FHOD1Q9Y613 1164 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 HS3ST4Q9Y661 456 aa11.19□□□□□ -0.62
VTI1BP3-201ENST00000550220 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms