RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SLC35B2	Q8TB61	432 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	OSCP1	Q8WVF1	389 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	TFB1M	Q8WVM0	346 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ATP2A3	Q93084	1043 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	ELSPBP1	Q96BH3	223 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	KRT12	Q99456	494 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	BBS2	Q9BXC9	721 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SPHK2	Q9NRA0	654 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	PLSCR2	Q9NRY7	297 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	EPS15L1	Q9UBC2	864 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SAE1	Q9UBE0	346 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	NR2E1	Q9Y466	385 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	WNT6	Q9Y6F9	365 aa		11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.93	□□□□□ -0.5
CNOT2-223	ENST00000550160	SGK1	O00141	431 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	DFFA	O00273	331 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	GFRA2	O00451	464 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	MBTPS2	O43462	519 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ECI2	O75521	394 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	LUC7L3	O95232	432 aa	Known RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ITGAV	P06756	1048 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	RHOC	P08134	193 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	STIP1	P31948	543 aa	Known RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ACTN2	P35609	894 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	DR1	Q01658	176 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZNF33A	Q06730	810 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	GALNT2	Q10471	571 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	NR1H3	Q13133	447 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	POLD3	Q15054	466 aa	Predicted RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	SLC45A4	Q5BKX6	768 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	IER5L	Q5T953	404 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	HEATR6	Q6AI08	1181 aa	Known RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	TIGD7	Q6NT04	549 aa	Predicted RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZNF783	Q6ZMS7	281 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZNF354C	Q86Y25	554 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	MFN1	Q8IWA4	741 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	MFSD6L	Q8IWD5	586 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	ZDHHC14	Q8IZN3	488 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	CARNMT1	Q8N4J0	409 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	NPW	Q8N729	165 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	CCHCR1	Q8TD31	782 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	RSAD2	Q8WXG1	361 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	UBXN4	Q92575	508 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	CELF6	Q96J87	481 aa	Known RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	OLFM3	Q96PB7	478 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	FAM118B	Q9BPY3	351 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	MAGEH1	Q9H213	219 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	OCEL1	Q9H607	264 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	PCYOX1	Q9UHG3	505 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	DNPEP	Q9ULA0	475 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	HPCAL4	Q9UM19	191 aa		11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	DRG1	Q9Y295	367 aa	Known RBP	11.92	□□□□□ -0.5
CNOT2-223	ENST00000550160	TNRC18	O15417	2968 aa	Predicted RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	ILVBL	A1L0T0	632 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	GRXCR2	A6NFK2	248 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	FAM187A	A6NFU0	413 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	NEDD8-MDP1	E9PL57	170 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	NEBL	O76041	1014 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	PENK	P01210	267 aa	Predicted RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	PSMC3	P17980	439 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	FCAR	P24071	287 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	HOXD9	P28356	352 aa	Predicted RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	GARS	P41250	739 aa	Known RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	IRAK1	P51617	712 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	GAD2	Q05329	585 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	AP1B1	Q10567	949 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	SLC10A2	Q12908	348 aa	Predicted RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	PPP1R7	Q15435	360 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	ANO4	Q32M45	955 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	LEXM	Q3ZCV2	418 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	AFMID	Q63HM1	303 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	TANGO2	Q6ICL3	276 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	VIT	Q6UXI7	678 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	ADGRG2	Q8IZP9	1017 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	CPA6	Q8N4T0	437 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	CCDC89	Q8N998	374 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	RIN3	Q8TB24	985 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	NSMCE1	Q8WV22	266 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	SLCO2A1	Q92959	643 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	IRF7	Q92985	503 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	BHMT	Q93088	406 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	HDAC11	Q96DB2	347 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	MYEOV	Q96EZ4	313 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.91	□□□□□ -0.5	2e-8	■■■■■ 31.7
CNOT2-223	ENST00000550160	XPO6	Q96QU8	1125 aa	Known RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	KXD1	Q9BQD3	176 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	TMEM121	Q9BTD3	319 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	PHF7	Q9BWX1	381 aa	Predicted RBP	11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	RAB17	Q9H0T7	212 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	MUC3B	Q9H195	1237 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	SP110	Q9HB58	689 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	HAUS2	Q9NVX0	235 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	MARK1	Q9P0L2	795 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	AMACR	Q9UHK6	382 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	TBC1D30	Q9Y2I9	924 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	MFHAS1	Q9Y4C4	1052 aa		11.91	□□□□□ -0.5
CNOT2-223	ENST00000550160	BCLAF3	A2AJT9	711 aa	Known RBP	11.9	□□□□□ -0.5
CNOT2-223	ENST00000550160	RASA4B	C9J798	803 aa		11.9	□□□□□ -0.5
CNOT2-223	ENST00000550160	CHAD	O15335	359 aa		11.9	□□□□□ -0.5

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