RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SUN2Q9UH99 717 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 SNX10Q9Y5X0 201 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 DCHS1Q96JQ0 3298 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 IGLV3-10A0A075B6K4 115 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 A0A1W2PQJ5 194 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 SIGLEC16A6NMB1 481 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 E9PAM4 449 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 NDUFS2O75306 463 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 IGLV3-19P01714 112 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 MZF1P28698 734 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 CD6P30203 668 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 PTGER3P43115 390 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 CTSOP43234 321 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 TPMTP51580 245 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 NETO1Q8TDF5 533 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 FAM172AQ8WUF8 416 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 RMDN1Q96DB5 314 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 VCPIP1Q96JH7 1222 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 SMOC1Q9H4F8 434 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 HAUS4Q9H6D7 363 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 TAS2R14Q9NYV8 317 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 VPS28Q9UK41 221 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 TBC1D30Q9Y2I9 924 aa17.73■□□□□ 0.43
CHMP1A-208ENST00000550102 CACNA1EQ15878 2313 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 EDDM13A0A1B0GTR0 161 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 TMCO5BA8MYB1 307 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 CNTN5O94779 1100 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 RHOCP08134 193 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 DESP17661 470 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 RRM1P23921 792 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 HOXD12P35452 270 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 NNMTP40261 264 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 HDAC4P56524 1084 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 RSPO4Q2I0M5 234 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 TTC31Q49AM3 519 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ALFQ53S48 1182 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 SH3PXD2AQ5TCZ1 1133 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF776Q68DI1 518 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 WDR59Q6PJI9 974 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF571Q7Z3V5 609 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 PIGKQ92643 395 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 CENPIQ92674 756 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 HSPA12BQ96MM6 686 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 FEM1AQ9BSK4 669 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 MUC3BQ9H195 1237 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ITM2CQ9NQX7 267 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 SLC25A13Q9UJS0 675 aa17.72■□□□□ 0.43
CHMP1A-208ENST00000550102 ADAMTS9Q9P2N4 1935 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 DRGXA6NNA5 263 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 DNTTP04053 509 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 C7P10643 843 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 OXTRP30559 389 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 ADRA1BP35368 520 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 NUMBP49757 651 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 STK19P49842 368 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF143P52747 638 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 RAB6CQ53S08 254 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 TDRD12Q587J7 1177 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 PPP1R15BQ5SWA1 713 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 C6orf118Q5T5N4 469 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 TCEAL6Q6IPX3 200 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 DCUN1D2Q6PH85 259 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 SETD3Q86TU7 594 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 SYT12Q8IV01 421 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 OR52K2Q8NGK3 314 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 SYN2Q92777 582 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 TCEAL3Q969E4 200 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 ALG14Q96F25 216 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 TOE1Q96GM8 510 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 RPL10LQ96L21 214 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 CNPY3Q9BT09 278 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 ZYG11BQ9C0D3 744 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 RAB6CQ9H0N0 254 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 RSPH9Q9H1X1 276 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 MTG2Q9H4K7 406 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 DLL3Q9NYJ7 618 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 MPP6Q9NZW5 540 aa17.71■□□□□ 0.43
CHMP1A-208ENST00000550102 ATXN2Q99700 1313 aaKnown RBP17.71■□□□□ 0.42
CHMP1A-208ENST00000550102 TARSL2A2RTX5 802 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 TTC34A8MYJ7 566 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 CCP110O43303 1012 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 ATMINO43313 823 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 RNASEH1O60930 286 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 SIN3BO75182 1162 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 GZMAP12544 262 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 ITPKAP23677 461 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 OR1E1P30953 314 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 RPS14P62263 151 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 RPL7AP62424 266 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 ZBED6P86452 979 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 FOXK2Q01167 660 aa17.7■□□□□ 0.42
CHMP1A-208ENST00000550102 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms