RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 IFT122Q9HBG6 1241 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 PARVGQ9HBI0 331 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 RGL1Q9NZL6 768 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 FBXO2Q9UK22 296 aaPredicted RBP5.85□□□□□ -1.47
PFDN5-209ENST00000550069 ST3GAL5Q9UNP4 418 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 EXOC7Q9UPT5 735 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 GIT1Q9Y2X7 761 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 RPS6KL1Q9Y6S9 549 aa5.85□□□□□ -1.47
PFDN5-209ENST00000550069 TNRC18O15417 2968 aaPredicted RBP5.85□□□□□ -1.47
PFDN5-209ENST00000550069 TRIP11Q15643 1979 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PDCD11Q14690 1871 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 ADGRA3Q8IWK6 1321 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 ARHGEF37A1IGU5 675 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GOLGA6BA6NDN3 693 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GOLGA6L4A6NEF3 574 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 DAPK3O43293 454 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PRAMEF4O60810 478 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 KINO60870 393 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 TBCAO75347 108 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 KATNA1O75449 491 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 LDHAP00338 332 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 JUNP05412 331 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PLA2G4BP0C869 781 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GHRP10912 638 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 LAG3P18627 525 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PEX19P40855 299 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GPR15P49685 360 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 FXR1P51114 621 aaKnown RBP eCLIP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CLCN3P51790 818 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 SLC12A3P55017 1021 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 NPEPPSP55786 919 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 DGCR2P98153 550 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CREMQ03060 361 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PUM1Q14671 1186 aaKnown RBP eCLIP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CRYMQ14894 314 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 RNF187Q5TA31 235 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 C1QL3Q5VWW1 255 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 RNF219Q5W0B1 726 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 PDXDC1Q6P996 788 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 SLC27A1Q6PCB7 646 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 FOXR2Q6PJQ5 311 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 FAM111BQ6SJ93 734 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 KRBA2Q6ZNG9 492 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CATSPER4Q7RTX7 472 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CCDC186Q7Z3E2 898 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 DEFB128Q7Z7B8 93 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 FAM228AQ86W67 206 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CCDC65Q8IXS2 484 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CMTM4Q8IZR5 234 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 LRRC43Q8N309 656 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 LSM14AQ8ND56 463 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CCDC112Q8NEF3 446 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 RAD54LQ92698 747 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 EXTL1Q92935 676 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 RMDN2Q96LZ7 410 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CDCA3Q99618 268 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 TMEM175Q9BSA9 504 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 MMTAG2Q9BU76 263 aaKnown RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 FAM49AQ9H0Q0 323 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 CSRNP2Q9H175 543 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 KIAA1586Q9HCI6 787 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 XPNPEP1Q9NQW7 623 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 SLC38A7Q9NVC3 462 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 ARGLU1Q9NWB6 273 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-209ENST00000550069 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 TNFSF13BQ9Y275 285 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 STXBP5LQ9Y2K9 1186 aa5.84□□□□□ -1.47
PFDN5-209ENST00000550069 BRCA2P51587 3418 aa5.84□□□□□ -1.48
PFDN5-209ENST00000550069 MTCL1Q9Y4B5 1905 aaKnown RBP5.84□□□□□ -1.48
PFDN5-209ENST00000550069 UMODL1Q5DID0 1318 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 A0A087WZ62 844 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 FRMD3A2A2Y4 597 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 EIF3DO15371 548 aaKnown RBP eCLIP5.83□□□□□ -1.48
PFDN5-209ENST00000550069 MTSS1O43312 755 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 USO1O60763 962 aaKnown RBP5.83□□□□□ -1.48
PFDN5-209ENST00000550069 TOM1L1O75674 476 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 MT-CO1P00395 513 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 VTNP04004 478 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 MCF2P10911 925 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 TNFRSF1AP19438 455 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 GLRA2P23416 452 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 CTSSP25774 331 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 CD52P31358 61 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 STAT6P42226 847 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 ME1P48163 572 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 SCNN1GP51170 649 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 GTF2BQ00403 316 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 KRT17Q04695 432 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 ELAVL2Q12926 359 aaKnown RBP5.83□□□□□ -1.48
PFDN5-209ENST00000550069 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
PFDN5-209ENST00000550069 CAPSQ13938 189 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 CSRP2Q16527 193 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 AAK1Q2M2I8 961 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 MUM1Q2TAK8 710 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 INAVAQ3KP66 663 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 ZSCAN23Q3MJ62 389 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 C9orf50Q5SZB4 431 aa5.83□□□□□ -1.48
PFDN5-209ENST00000550069 RESP18Q5W5W9 173 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms