RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FKBP3Q00688 224 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 E2F1Q01094 437 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 SEMG2Q02383 582 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 STILQ15468 1287 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 COBLL1Q53SF7 1204 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 DCAF6Q58WW2 860 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 PITRM1Q5JRX3 1037 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 HES3Q5TGS1 186 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 SMYD5Q6GMV2 418 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 PRPF39Q86UA1 669 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 SPATS2Q86XZ4 545 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 CCDC117Q8IWD4 279 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 CFAP52Q8N1V2 620 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 CARNMT1Q8N4J0 409 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 OR14C36Q8NHC7 312 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 BAP1Q92560 729 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 ZSWIM1Q9BR11 485 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 ARHGAP20Q9P2F6 1191 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 DMTF1Q9Y222 760 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 DOCK9Q9BZ29 2069 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3DA0A087WVF3 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3IA0A087WXS9 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3EA0A087X179 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3KA0A087X1G2 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TEX51A0A1B0GUA7 166 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 A0A1W2PQ27 194 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 A0A1W2PQ64 194 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3FA6NER0 549 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3LB9A6J9 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC7A4O43246 635 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 MAGEC1O60732 1142 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 ZNF202O95125 648 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 LUC7L3O95232 432 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 PRB1P04280 392 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3HP0C7X1 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 DRD3P35462 400 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 NNMTP40261 264 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 PRCPP42785 496 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 RGS7P49802 495 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 CDH18Q13634 790 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 ELAVL3Q14576 367 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 ANKRD40Q6AI12 368 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3GQ6DHY5 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3CQ6IPX1 549 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 NAPEPLDQ6IQ20 393 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 MMS22LQ6ZRQ5 1243 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 GPR155Q7Z3F1 870 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 TBC1D3Q8IZP1 549 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 APCDD1Q8J025 514 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 DCBLD1Q8N8Z6 715 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 FRS2Q8WU20 508 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC35C1Q96A29 364 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 SERPINB11Q96P15 392 aa10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 NYNRINQ9P2P1 1898 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-207ENST00000550051 PTPRQQ9UMZ3 2332 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 PIK3R2O00459 728 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 SART1O43290 800 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 IL1BP01584 269 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 GLDCP23378 1020 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 ACTN2P35609 894 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 OXCT1P55809 520 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 CLDN6P56747 220 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 KRT85P78386 507 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 INSM1Q01101 510 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 SULT2A1Q06520 285 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 EIF4EBP2Q13542 120 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 RNF219Q5W0B1 726 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 TMEM270Q6UE05 265 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 SMYD4Q8IYR2 804 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 DQX1Q8TE96 717 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 COL26A1Q96A83 441 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 BTN2A3PQ96KV6 586 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 RPL10LQ96L21 214 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 FCRL3Q96P31 734 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 SPAG5Q96R06 1193 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 PPP1R9BQ96SB3 815 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 TRIM62Q9BVG3 475 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 CYTH4Q9UIA0 394 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 CLCA2Q9UQC9 943 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 NAALADL1Q9UQQ1 740 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 PCDHB4Q9Y5E5 795 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-207ENST00000550051 CAPN8A6NHC0 703 aa10.16□□□□□ -0.78
TRAFD1-207ENST00000550051 PRAMEF26H0Y7S4 382 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms