RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 FAM126AQ9BYI3 521 aaPredicted RBP9.43□□□□□ -0.9
PPFIA2-216ENST00000549396 MMADHCQ9H3L0 296 aaPredicted RBP9.43□□□□□ -0.9
PPFIA2-216ENST00000549396 CATSPERZQ9NTU4 200 aa9.43□□□□□ -0.9
PPFIA2-216ENST00000549396 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
PPFIA2-216ENST00000549396 DOT1LQ8TEK3 1739 aa9.43□□□□□ -0.9
PPFIA2-216ENST00000549396 ARVCFO00192 962 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 NDUFS2O75306 463 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CILPO75339 1184 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PCDH8O95206 1070 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 INHAP05111 366 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CCDC130P13994 396 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ADRA1DP25100 572 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PPP2R1BP30154 601 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PNLIPRP1P54315 467 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 IRX1P78414 480 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RFTN1Q14699 578 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ADRM1Q16186 407 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 FAM183BPQ6ZVS7 135 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 FAM162AQ96A26 154 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 FZD8Q9H461 694 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RNPEPQ9H4A4 650 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SPATS2LQ9NUQ6 558 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CORO2BQ9UQ03 480 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CNTNAP1P78357 1384 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SETD1AO15047 1707 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ZBTB14O43829 449 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CXCL14O95715 111 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RHOQP17081 205 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 NDUFV1P49821 464 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PEX5P50542 639 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 MIIPQ5JXC2 388 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 GJC2Q5T442 439 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RFX8Q6ZV50 586 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 AVL9Q8NBF6 648 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ZBTB45Q96K62 511 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CEP295NLQ96MC4 621 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CEP44Q9C0F1 390 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CDC42EP4Q9H3Q1 356 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ELOVL6Q9H5J4 265 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 STAU1O95793 577 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ACAT1P24752 427 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PTPN7P35236 360 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 KRT78Q8N1N4 520 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CCDC3Q9BQI4 270 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 KLHL28Q9NXS3 571 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 TRIM10Q9UDY6 481 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ZNF214Q9UL59 606 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SMIM28A0A1B0GU29 152 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 PSMD12O00232 456 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 IRAK2O43187 625 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 JAK1P23458 1154 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CCNG1P51959 295 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ATAT1Q5SQI0 421 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CYB5D1Q6P9G0 228 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 SLC26A9Q7LBE3 791 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 HASPINQ8TF76 798 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 ETNK2Q9NVF9 386 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 RAB21Q9UL25 225 aa9.42□□□□□ -0.9
PPFIA2-216ENST00000549396 MGAT4DA6NG13 374 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 F5H423 210 aaPredicted RBP9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 MDM4O15151 490 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 SGTAO43765 313 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 ATP9AO75110 1047 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 SERPIND1P05546 499 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 SMPD1P17405 629 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 KRT20P35900 424 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 SOX10P56693 466 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 CSTF3Q12996 717 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 DPYSL3Q14195 570 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 ACOX1Q15067 660 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 KCNT2Q6UVM3 1135 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 TRPM8Q7Z2W7 1104 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 CCT8L2Q96SF2 557 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 GMLQ99445 158 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 MFSD1Q9H3U5 465 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 NRDE2Q9H7Z3 1164 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 INTS7Q9NVH2 962 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 PCDHB1Q9Y5F3 818 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 CCNE2O96020 404 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 PTPN2P17706 415 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 TPSB2P20231 275 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 EEF1DP29692 281 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 HPCAL1P37235 193 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 NDST2P52849 883 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 TPSAB1Q15661 275 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 C6orf10Q5SRN2 563 aa9.41□□□□□ -0.9
PPFIA2-216ENST00000549396 MROH9Q5TGP6 573 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms