RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 SPHK2Q9NRA0 654 aa5.16□□□□□ -1.58
APP-217ENST00000548570 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.16□□□□□ -1.58
APP-217ENST00000548570 DUS2Q9NX74 493 aaKnown RBP5.16□□□□□ -1.58
APP-217ENST00000548570 PLK2Q9NYY3 685 aa5.16□□□□□ -1.58
APP-217ENST00000548570 SMARCAL1Q9NZC9 954 aa5.16□□□□□ -1.58
APP-217ENST00000548570 OR12D3Q9UGF7 316 aa5.16□□□□□ -1.58
APP-217ENST00000548570 PRKAG3Q9UGI9 489 aa5.16□□□□□ -1.58
APP-217ENST00000548570 INTS6Q9UL03 887 aaKnown RBP5.16□□□□□ -1.58
APP-217ENST00000548570 VANGL2Q9ULK5 521 aa5.16□□□□□ -1.58
APP-217ENST00000548570 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
APP-217ENST00000548570 hCG_1818297A0A087WSY0 165 aa5.15□□□□□ -1.59
APP-217ENST00000548570 A0A0D9SEW6 157 aa5.15□□□□□ -1.59
APP-217ENST00000548570 KRBA1A5PL33 1030 aa5.15□□□□□ -1.59
APP-217ENST00000548570 WASH4PA8MWX3 477 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PRRT4C9JH25 899 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PDE2AO00408 941 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 ZNF185O15231 689 aa5.15□□□□□ -1.59
APP-217ENST00000548570 HOXC11O43248 304 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 ZSCAN12O43309 604 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SPOPO43791 374 aa5.15□□□□□ -1.59
APP-217ENST00000548570 CREB3O43889 395 aa5.15□□□□□ -1.59
APP-217ENST00000548570 RNF8O76064 485 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PEX11BO96011 259 aa5.15□□□□□ -1.59
APP-217ENST00000548570 APOEP02649 317 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SRFP11831 508 aa5.15□□□□□ -1.59
APP-217ENST00000548570 TYRP14679 529 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PECAM1P16284 738 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 RHOQP17081 205 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ERCC2P18074 760 aa5.15□□□□□ -1.59
APP-217ENST00000548570 MZF1P28698 734 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 HLA-FP30511 346 aa5.15□□□□□ -1.59
APP-217ENST00000548570 CD70P32970 193 aa5.15□□□□□ -1.59
APP-217ENST00000548570 HCAR3P49019 387 aa5.15□□□□□ -1.59
APP-217ENST00000548570 NUMBP49757 651 aa5.15□□□□□ -1.59
APP-217ENST00000548570 GSK3AP49840 483 aa5.15□□□□□ -1.59
APP-217ENST00000548570 AIF1P55008 147 aa5.15□□□□□ -1.59
APP-217ENST00000548570 NAP1L1P55209 391 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 CDH6P55285 790 aa5.15□□□□□ -1.59
APP-217ENST00000548570 GNG11P61952 73 aa5.15□□□□□ -1.59
APP-217ENST00000548570 GBE1Q04446 702 aa5.15□□□□□ -1.59
APP-217ENST00000548570 FZD5Q13467 585 aa5.15□□□□□ -1.59
APP-217ENST00000548570 TDGQ13569 410 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PDGFRLQ15198 375 aa5.15□□□□□ -1.59
APP-217ENST00000548570 GEN1Q17RS7 908 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ARHGAP29Q52LW3 1261 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ANKRD20A8PQ5CZ79 823 aa5.15□□□□□ -1.59
APP-217ENST00000548570 NCBP2-AS2Q69YL0 99 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SLC9A4Q6AI14 798 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SPOCD1Q6ZMY3 1216 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ARHGAP36Q6ZRI8 547 aa5.15□□□□□ -1.59
APP-217ENST00000548570 MTSS1LQ765P7 747 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PEX26Q7Z412 305 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ADIPOR2Q86V24 386 aa5.15□□□□□ -1.59
APP-217ENST00000548570 BPHLQ86WA6 291 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 CHSY1Q86X52 802 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.59
APP-217ENST00000548570 CREG2Q8IUH2 290 aa5.15□□□□□ -1.59
APP-217ENST00000548570 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.15□□□□□ -1.59
APP-217ENST00000548570 GJD3Q8N144 294 aa5.15□□□□□ -1.59
APP-217ENST00000548570 CCDC33Q8N5R6 958 aa5.15□□□□□ -1.59
APP-217ENST00000548570 NAT16Q8N8M0 369 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ATP6V0D2Q8N8Y2 350 aa5.15□□□□□ -1.59
APP-217ENST00000548570 TRIM58Q8NG06 486 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DEPDC1BQ8WUY9 529 aa5.15□□□□□ -1.59
APP-217ENST00000548570 BHMTQ93088 406 aa5.15□□□□□ -1.59
APP-217ENST00000548570 RNF34Q969K3 372 aa5.15□□□□□ -1.59
APP-217ENST00000548570 NXPE3Q969Y0 559 aa5.15□□□□□ -1.59
APP-217ENST00000548570 E2F7Q96AV8 911 aa5.15□□□□□ -1.59
APP-217ENST00000548570 OTUB2Q96DC9 234 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ITPKCQ96DU7 683 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SCARF2Q96GP6 870 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 MS4A14Q96JA4 679 aa5.15□□□□□ -1.59
APP-217ENST00000548570 CALR3Q96L12 384 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 RNF157Q96PX1 679 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DCLK3Q9C098 648 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DHX35Q9H5Z1 703 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 LRRC19Q9H756 370 aa5.15□□□□□ -1.59
APP-217ENST00000548570 ZFAND3Q9H8U3 227 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SLC2A4RGQ9NR83 387 aa5.15□□□□□ -1.59
APP-217ENST00000548570 IGSF9Q9P2J2 1179 aa5.15□□□□□ -1.59
APP-217ENST00000548570 TBC1D14Q9P2M4 693 aa5.15□□□□□ -1.59
APP-217ENST00000548570 SAE1Q9UBE0 346 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 PPARGC1AQ9UBK2 798 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 MUTYHQ9UIF7 546 aa5.15□□□□□ -1.59
APP-217ENST00000548570 LSM7Q9UK45 103 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 AMFRQ9UKV5 643 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DUSP12Q9UNI6 340 aa5.15□□□□□ -1.59
APP-217ENST00000548570 TBC1D30Q9Y2I9 924 aa5.15□□□□□ -1.59
APP-217ENST00000548570 R3HDM2Q9Y2K5 976 aaKnown RBP5.15□□□□□ -1.59
APP-217ENST00000548570 MTF2Q9Y483 593 aaPredicted RBP5.15□□□□□ -1.59
APP-217ENST00000548570 ACTL7AQ9Y615 435 aa5.15□□□□□ -1.59
APP-217ENST00000548570 A0A0C4DFX4 3053 aa5.15□□□□□ -1.59
APP-217ENST00000548570 DENND4AQ7Z401 1863 aa5.14□□□□□ -1.59
APP-217ENST00000548570 A0A0A0MRY4 1105 aa5.14□□□□□ -1.59
APP-217ENST00000548570 CCDC66A2RUB6 948 aa5.14□□□□□ -1.59
APP-217ENST00000548570 LRRD1A4D1F6 860 aa5.14□□□□□ -1.59
APP-217ENST00000548570 ZNF487B1APH4 448 aa5.14□□□□□ -1.59
APP-217ENST00000548570 NEDD8-MDP1E9PL57 170 aa5.14□□□□□ -1.59
APP-217ENST00000548570 F5H5T6 163 aa5.14□□□□□ -1.59
APP-217ENST00000548570 SPECC1L-ADORA2AF8WAN1 911 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms