RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 UPK3BL2E5RIL1 263 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 M0QYT0 321 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 HSF2BPO75031 334 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 RNASEH2AO75792 299 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ASLP04424 464 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ERBB2P04626 1255 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 PROS1P07225 676 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 GLI1P08151 1106 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SRPRAP08240 638 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SLC2A3P11169 496 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 PDGFRAP16234 1089 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 MZF1P28698 734 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 CCR1P32246 355 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 MATKP42679 507 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 STK19P49842 368 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SNX16P57768 344 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 BPIFB4P59827 614 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ECT2LQ008S8 904 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SLC6A3Q01959 620 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ZBTB16Q05516 673 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SLC14A1Q13336 389 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF177Q13360 481 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 RAPGEF1Q13905 1077 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 TEAD4Q15561 434 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 MAN2A1Q16706 1144 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 KIF19Q2TAC6 998 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 HLA-BQ31612 363 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 HNRNPA1L2Q32P51 320 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 TTC31Q49AM3 519 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ACCSLQ4AC99 568 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 C9orf64Q5T6V5 341 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 TAF3Q5VWG9 929 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF776Q68DI1 518 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 FAM183BPQ6ZVS7 135 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 CCAR2Q8N163 923 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 CHCHD4Q8N4Q1 142 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 IGSF8Q969P0 613 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 BIRC7Q96CA5 298 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 MYO19Q96H55 970 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 MRGPRX3Q96LB0 322 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 RPRD1AQ96P16 312 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SLC2A13Q96QE2 648 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 FAM129BQ96TA1 746 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 OMDQ99983 421 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 TUBGCP2Q9BSJ2 902 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ZDHHC5Q9C0B5 715 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SIK2Q9H0K1 926 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 RSPH9Q9H1X1 276 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 NEUROG2Q9H2A3 272 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 PABPC3Q9H361 631 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 FBRSQ9HAH7 460 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SGK2Q9HBY8 427 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SAMSN1Q9NSI8 373 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 NFE2L3Q9Y4A8 694 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 SLCO1B1Q9Y6L6 691 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
SCAF11-211ENST00000547950 HELZP42694 1942 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 EDDM13A0A1B0GTR0 161 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 A0A1W2PP55 124 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 TARSL2A2RTX5 802 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 MID1O15344 667 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 GJB3O75712 270 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 IL1BP01584 269 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 IGLV3-25P01717 112 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 VAV1P15498 845 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 CD27P26842 260 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 ERCC5P28715 1186 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 SLC8A1P32418 973 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 NNMTP40261 264 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PSMD8P48556 350 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 GALCP54803 685 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 BNC1Q01954 994 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 CENPCQ03188 943 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KCNMA1Q12791 1236 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 EIF4EBP2Q13542 120 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 HNRNPDQ14103 355 aaKnown RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KCNJ12Q14500 433 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 DRAP1Q14919 205 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-211ENST00000547950 CST6Q15828 149 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PTPN20Q4JDL3 420 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 MIIPQ5JXC2 388 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 RABGAP1LQ5R372 815 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 PRAMEF14Q5SWL7 426 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KLHDC7AQ5VTJ3 777 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 KIAA0895LQ68EN5 471 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 FBXL22Q6P050 247 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 IL27RAQ6UWB1 636 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 OLFML1Q6UWY5 402 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 LAYNQ6UX15 382 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 UNQ6494/PRO21346Q6UXR6 183 aa6.91□□□□□ -1.3
SCAF11-211ENST00000547950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms