RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LARGE1O95461 756 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ONECUT2O95948 504 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ARP10275 920 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 OAS2P29728 719 aaKnown RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 PPIFP30405 207 aaKnown RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 LRPAP1P30533 357 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 GGT5P36269 586 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 LIPAP38571 399 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 CREB5Q02930 508 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ACVR2BQ13705 512 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 BECN1Q14457 450 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 RASA2Q15283 850 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 P3H1Q32P28 736 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 MANEALQ5VSG8 457 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 TMEM108Q6UXF1 575 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 CRELD2Q6UXH1 353 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF66Q6ZN08 573 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 KCTD20Q7Z5Y7 419 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 TECPR1Q7Z6L1 1165 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 PXKQ7Z7A4 578 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 VSIG1Q86XK7 387 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 TAGAPQ8N103 731 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 FSIP1Q8NA03 581 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 NFKBIDQ8NI38 313 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ETNPPLQ8TBG4 499 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 BPIFB1Q8TDL5 484 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 KCNG4Q8TDN1 519 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 FKBP10Q96AY3 582 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 RBM17Q96I25 401 aaKnown RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 THAP7Q9BT49 309 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 TPSD1Q9BZJ3 242 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ZWILCHQ9H900 591 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 LIN7CQ9NUP9 197 aaKnown RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 DLL3Q9NYJ7 618 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 SH3BP4Q9P0V3 963 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 DNMT3BQ9UBC3 853 aaKnown RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 CHORDC1Q9UHD1 332 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-210ENST00000547654 PCDHGB4Q9UN71 923 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 GABRQQ9UN88 632 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 PDS5BQ9NTI5 1447 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 ATAD2BQ9ULI0 1458 aa4.62□□□□□ -1.67
SCAF11-210ENST00000547654 H7C0S8 307 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 TNPO2O14787 897 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 MLYCDO95822 493 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 F9P00740 461 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 CSH1P0DML2 217 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 CSH2P0DML3 217 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 LAMP2P13473 410 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZFXP17010 805 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 YY1P25490 414 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 CD6P30203 668 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 MMP13P45452 471 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 PXNP49023 591 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 HARS2P49590 506 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 PLCD1P51178 756 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 POLGP54098 1239 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 LOXL3P58215 753 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 NLRP5P59047 1200 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 LRMPQ12912 555 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 KLHL22Q53GT1 634 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF569Q5MCW4 686 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 HECTD3Q5T447 861 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 LIPMQ5VYY2 423 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 SLC18B1Q6NT16 456 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 CEP85Q6P2H3 762 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 H1FNTQ75WM6 255 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZSCAN30Q86W11 494 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF280BQ86YH2 543 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 NOC3LQ8WTT2 800 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 FAM120BQ96EK7 910 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 KTI12Q96EK9 354 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 VMP1Q96GC9 406 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 NUDT22Q9BRQ3 303 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 FUZQ9BT04 418 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 PTDSS2Q9BVG9 487 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 MXD3Q9BW11 206 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 SLC25A18Q9H1K4 315 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 SEPT11Q9NVA2 429 aaKnown RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 EHD3Q9NZN3 535 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 TBC1D14Q9P2M4 693 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF215Q9UL58 517 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-210ENST00000547654 USP22Q9UPT9 525 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 GDAQ9Y2T3 454 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 ZNF711Q9Y462 761 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 DCAF1Q9Y4B6 1507 aa4.61□□□□□ -1.67
SCAF11-210ENST00000547654 PTGES3LE9PB15 166 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 PPP6CO00743 305 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 PPEF2O14830 753 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CLGNO14967 610 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 TAF5LO75529 589 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 HSPA4LO95757 839 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 IL6RP08887 468 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CLTBP09497 229 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 WEE2P0C1S8 567 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 CYP2D6P10635 497 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 NDUFB7P17568 137 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 ITGALP20701 1170 aa4.6□□□□□ -1.67
SCAF11-210ENST00000547654 NNMTP40261 264 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms