RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CENPIQ92674 756 aaPredicted RBP16.36■□□□□ 0.21
DDX54-204ENST00000546898 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 PRSS16Q9NQE7 514 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 DLL3Q9NYJ7 618 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 E9PAM4 449 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 NDUFS2O75306 463 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 GJB6O95452 261 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 TPM3P06753 285 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 GZMAP12544 262 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 DESP17661 470 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 MZF1P28698 734 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 NNMTP40261 264 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 PTGER3P43115 390 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 TPMTP51580 245 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 NRG1Q02297 640 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.213e-8■■□□□ 13.5
DDX54-204ENST00000546898 RSPO4Q2I0M5 234 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 AASDHQ4L235 1098 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 PPP1R15BQ5SWA1 713 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 PEAR1Q5VY43 1037 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 E4F1Q66K89 784 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 SETD3Q86TU7 594 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 SYT12Q8IV01 421 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 NTAN1Q96AB6 310 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 CD93Q9NPY3 652 aa16.35■□□□□ 0.21
DDX54-204ENST00000546898 WSB2Q9NYS7 404 aaPredicted RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 CDV3Q9UKY7 258 aaKnown RBP16.35■□□□□ 0.21
DDX54-204ENST00000546898 CACNA1EQ15878 2313 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 CNTN5O94779 1100 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 DNTTP04053 509 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 RHOCP08134 193 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 RRM1P23921 792 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ADRA1BP35368 520 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 CTSOP43234 321 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 ZNF143P52747 638 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 LIMK1P53667 647 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 HDAC4P56524 1084 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ZNF33AQ06730 810 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 SF3A2Q15428 464 aaKnown RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 CCDC6Q16204 474 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 TTC31Q49AM3 519 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 ALFQ53S48 1182 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 C6orf118Q5T5N4 469 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ZNF776Q68DI1 518 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ZNF571Q7Z3V5 609 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 RABEPKQ7Z6M1 372 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 PIGKQ92643 395 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 SYN2Q92777 582 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 FOXJ1Q92949 421 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ALG14Q96F25 216 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 TOE1Q96GM8 510 aaKnown RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 MCEEQ96PE7 176 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 ZYG11BQ9C0D3 744 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 RSPH9Q9H1X1 276 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 RETREG1Q9H6L5 497 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 TMPRSS4Q9NRS4 437 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 IFNKQ9P0W0 207 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 PPARGC1AQ9UBK2 798 aaKnown RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 EVLQ9UI08 416 aaPredicted RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 SLC25A13Q9UJS0 675 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 VPS28Q9UK41 221 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 SCML1Q9UN30 329 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 OR51B4Q9Y5P0 310 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 SNX10Q9Y5X0 201 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 BZW2Q9Y6E2 419 aaKnown RBP16.34■□□□□ 0.21
DDX54-204ENST00000546898 NUMA1Q14980 2115 aa16.34■□□□□ 0.21
DDX54-204ENST00000546898 KHNYNO15037 678 aaKnown RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 RNASEH1O60930 286 aaKnown RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 SIN3BO75182 1162 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 RPS14P62263 151 aaKnown RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 ZBED6P86452 979 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 FOXK2Q01167 660 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 SFSWAPQ12872 951 aaKnown RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 SH3PXD2AQ5TCZ1 1133 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 DCUN1D2Q6PH85 259 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 CACUL1Q86Y37 369 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 CADM4Q8NFZ8 388 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 OR52K2Q8NGK3 314 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 ZNF419Q96HQ0 510 aaPredicted RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 RTKNQ9BST9 563 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 CNPY3Q9BT09 278 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 C2orf49Q9BVC5 232 aaPredicted RBP16.33■□□□□ 0.2
DDX54-204ENST00000546898 MUC3BQ9H195 1237 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 OSBPL2Q9H1P3 480 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 PCED1AQ9H1Q7 454 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 TSPY26PQ9H489 355 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 SMOC1Q9H4F8 434 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 PARVAQ9NVD7 372 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 TAS2R14Q9NYV8 317 aa16.33■□□□□ 0.2
DDX54-204ENST00000546898 PILRBQ9UKJ0 227 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms