RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TMEM120AQ9BXJ8 343 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-224ENST00000545688 ZNF304Q9HCX3 659 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 KRCC1Q9NPI7 259 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-224ENST00000545688 SELENONQ9NZV5 590 aa5.22□□□□□ -1.57
SNHG1-224ENST00000545688 CAND2O75155 1236 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 LCKP06239 509 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 CPA1P15085 419 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 ASIC2Q16515 512 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 SLC16A12Q6ZSM3 486 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 Q6ZTK2 550 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 C18orf65Q6ZTR6 163 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 SRLQ86TD4 932 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 GATAD2AQ86YP4 633 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 SPATA2LQ8IUW3 424 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-224ENST00000545688 SYTL1Q8IYJ3 562 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 SLC25A41Q8N5S1 370 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 STYXQ8WUJ0 223 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 TNIP3Q96KP6 325 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 MEIS3Q99687 375 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 PLAC1Q9HBJ0 212 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 ARNT2Q9HBZ2 717 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 PNRC2Q9NPJ4 139 aaKnown RBP5.21□□□□□ -1.58
SNHG1-224ENST00000545688 GEMIN8Q9NWZ8 242 aaKnown RBP5.21□□□□□ -1.58
SNHG1-224ENST00000545688 PLK2Q9NYY3 685 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 MYO6Q9UM54 1294 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 CNTN6Q9UQ52 1028 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 DTX4Q9Y2E6 619 aa5.21□□□□□ -1.58
SNHG1-224ENST00000545688 BECN2A8MW95 431 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 KRT18P05783 430 aaKnown RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 CHRNA5P30532 468 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 STAT1P42224 750 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 RASSF2P50749 326 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 POLE2P56282 527 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 ROR2Q01974 943 aaKnown RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 ZBTB16Q05516 673 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 LTBQ06643 244 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 STARD3Q14849 445 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 SLC4A8Q2Y0W8 1093 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 DLK2Q6UY11 383 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 CCDC25Q86WR0 208 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 KLBQ86Z14 1044 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 DCP1BQ8IZD4 617 aaKnown RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 MED30Q96HR3 178 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 CCDC136Q96JN2 1154 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 FRMD8Q9BZ67 464 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 CDC23Q9UJX2 597 aa5.2□□□□□ -1.58
SNHG1-224ENST00000545688 MAGED2Q9UNF1 606 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 ZCCHC6Q5VYS8 1495 aaKnown RBP5.2□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A18PA6NE21 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A16PA6NEW6 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 AGAP5A6NIR3 686 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 MBD3L5A6NJ08 208 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A9PA6NNJ1 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A5PA8MXJ8 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 INAFM1C9JVW0 142 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 TNFRSF6BO95407 300 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 LARGE1O95461 756 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 CYP1A2P05177 515 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 MYL1P05976 194 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 ACAA1P09110 424 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A15PP0C7V4 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM90A14PP0C7W9 464 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 SLC16A2P36021 539 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 TECP42680 631 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 KCNJ4P48050 445 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 RHAGQ02094 409 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 EGR4Q05215 589 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 TRAF1Q13077 416 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 GPR18Q14330 331 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 INO80DQ53TQ3 878 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 TMEM217Q8N7C4 229 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 ENGASEQ8NFI3 743 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 OR1N1Q8NGS0 311 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 GABPB2Q8TAK5 448 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 FAM110DQ8TAY7 271 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 NUDCD2Q8WVJ2 157 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 HMGB4Q8WW32 186 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 TMEM41AQ96HV5 264 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 WDR77Q9BQA1 342 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-224ENST00000545688 DCLK3Q9C098 648 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 RNF146Q9NTX7 359 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 HIF1ANQ9NWT6 349 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 NCKIPSDQ9NZQ3 722 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 LZTS1Q9Y250 596 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 SCRIBQ14160 1630 aa5.19□□□□□ -1.58
SNHG1-224ENST00000545688 DOCK7Q96N67 2140 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 TRBV5-7A0A0A0MS05 114 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 A0A1B0GVT2 93 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 RGS14O43566 566 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 LCATP04180 440 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 PPM1AP35813 382 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 RFX5P48382 616 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-224ENST00000545688 SELENOVP59797 346 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 GPS2Q13227 327 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 TRIM60Q495X7 471 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 SLC30A9Q6PML9 568 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 FAM217AQ8IXS0 508 aa5.18□□□□□ -1.58
SNHG1-224ENST00000545688 FAM186BQ8IYM0 893 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms