RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KIAA0907Q7Z7F0 614 aaPredicted RBP14□□□□□ -0.17
SP140-213ENST00000543928 SETD3Q86TU7 594 aaPredicted RBP14□□□□□ -0.17
SP140-213ENST00000543928 AHI1Q8N157 1196 aa14□□□□□ -0.17
SP140-213ENST00000543928 RTL3Q8N8U3 475 aaKnown RBP14□□□□□ -0.17
SP140-213ENST00000543928 OR52K2Q8NGK3 314 aa14□□□□□ -0.17
SP140-213ENST00000543928 FAM71BQ8TC56 605 aa14□□□□□ -0.17
SP140-213ENST00000543928 WFIKKN2Q8TEU8 576 aa14□□□□□ -0.17
SP140-213ENST00000543928 RAPGEF5Q92565 580 aa14□□□□□ -0.17
SP140-213ENST00000543928 TSC1Q92574 1164 aa14□□□□□ -0.17
SP140-213ENST00000543928 CSPG4P5Q96PW8 444 aa14□□□□□ -0.17
SP140-213ENST00000543928 CALN1Q9BXU9 219 aa14□□□□□ -0.17
SP140-213ENST00000543928 C11orf16Q9NQ32 467 aa14□□□□□ -0.17
SP140-213ENST00000543928 NDFIP2Q9NV92 336 aa14□□□□□ -0.17
SP140-213ENST00000543928 DDX56Q9NY93 547 aaKnown RBP14□□□□□ -0.17
SP140-213ENST00000543928 DNAI1Q9UI46 699 aa14□□□□□ -0.17
SP140-213ENST00000543928 PYCARDQ9ULZ3 195 aa14□□□□□ -0.17
SP140-213ENST00000543928 ATG2BQ96BY7 2078 aa14□□□□□ -0.17
SP140-213ENST00000543928 WASH4PA8MWX3 477 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 RNF40O75150 1001 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 KRT1P04264 644 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 DCNP07585 359 aaKnown RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 ERCC2P18074 760 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 KDELR1P24390 212 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 IL4RP24394 825 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 MZF1P28698 734 aaPredicted RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 MARCKSL1P49006 195 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 NUMBP49757 651 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 CLCN5P51795 746 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 SLC12A1Q13621 1099 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 DPYSQ14117 519 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 DMC1Q14565 340 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 EIF4HQ15056 248 aaKnown RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 PLEKHG6Q3KR16 790 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 FUT11Q495W5 492 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 PITRM1Q5JRX3 1037 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 EMC10Q5UCC4 262 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 MBLAC2Q68D91 279 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 Q6ZS52 159 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 PEX26Q7Z412 305 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 NT5DC3Q86UY8 548 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 ADIPOR2Q86V24 386 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 MAP7D3Q8IWC1 876 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 REXO1L1PQ8IX06 675 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 APCDD1Q8J025 514 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 SYNPOQ8N3V7 929 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 FBXL6Q8N531 539 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 KRT35Q92764 455 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 CLDN23Q96B33 292 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 FEM1AQ9BSK4 669 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 CIPCQ9C0C6 399 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 MUC3BQ9H195 1237 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 TRMT1Q9NXH9 659 aaKnown RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 RCOR3Q9P2K3 495 aaPredicted RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
SP140-213ENST00000543928 INTS6Q9UL03 887 aaKnown RBP13.99□□□□□ -0.17
SP140-213ENST00000543928 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
SP140-213ENST00000543928 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
SP140-213ENST00000543928 A0A0D9SEW6 157 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ILVBLA1L0T0 632 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 TIMM44O43615 452 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 FTCDO95954 541 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 POLR2EP19388 210 aaKnown RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 AMPD1P23109 780 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 CTNNA1P35221 906 aaKnown RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 TIE1P35590 1138 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 KIR2DL1P43626 348 aaPredicted RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 PLK1P53350 603 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 GNA12Q03113 381 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 C2orf27AQ580R0 203 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 KATNAL2Q8IYT4 538 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ZNF513Q8N8E2 541 aaPredicted RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 UCMAQ8WVF2 138 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 SORCS1Q8WY21 1168 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 ALG14Q96F25 216 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ZNF670Q9BS34 389 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ZDHHC4Q9NPG8 344 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 ELOVL2Q9NXB9 296 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 VPS28Q9UK41 221 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 HCN2Q9UL51 889 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 STARD13Q9Y3M8 1113 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 OR51B4Q9Y5P0 310 aa13.98□□□□□ -0.17
SP140-213ENST00000543928 MYO18AQ92614 2054 aaKnown RBP13.98□□□□□ -0.17
SP140-213ENST00000543928 CCDC66A2RUB6 948 aa13.97□□□□□ -0.17
SP140-213ENST00000543928 C3orf70A6NLC5 250 aaPredicted RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 GPR37L1O60883 481 aa13.97□□□□□ -0.17
SP140-213ENST00000543928 RAMP2O60895 175 aa13.97□□□□□ -0.17
SP140-213ENST00000543928 ATP5BP06576 529 aaKnown RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 CHRM1P11229 460 aaPredicted RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 CTNNA2P26232 953 aa13.97□□□□□ -0.17
SP140-213ENST00000543928 RPS9P46781 194 aaKnown RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 MRPS21P82921 87 aaKnown RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 POLD3Q15054 466 aaPredicted RBP13.97□□□□□ -0.17
SP140-213ENST00000543928 ANKRD20A8PQ5CZ79 823 aa13.97□□□□□ -0.17
SP140-213ENST00000543928 TMEM31Q5JXX7 168 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms