RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SIX4Q9UIU6 781 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 RASAL2Q9UJF2 1139 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NAGPAQ9UK23 515 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NOL7Q9UMY1 257 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NME7Q9Y5B8 376 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 ARID1BQ8NFD5 2236 aaPredicted RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SPTAN1Q13813 2472 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CCDC187A0A096LP49 1063 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CDK2AP1O14519 115 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MUSKO15146 869 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 NOBOXO60393 691 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MAGEC1O60732 1142 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 SIN3BO75182 1162 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 TBCAO75347 108 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 BEST1O76090 585 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 LDHAP00338 332 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CST3P01034 146 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 PDGFAP04085 211 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ATP5BP06576 529 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 KRT7P08729 469 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ZDHHC11BP0C7U3 371 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 HGFP14210 728 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 POLR2EP19388 210 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MZF1P28698 734 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 NOS2P35228 1153 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 DDIT3P35638 169 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 PSMD8P48556 350 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 NUMBP49757 651 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CCR5P51681 352 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 POLE2P56282 527 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 PPP2CBP62714 309 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 PPP2CAP67775 309 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 GTF2BQ00403 316 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 KCNMA1Q12791 1236 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 EFEMP1Q12805 493 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CBLBQ13191 982 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 KCNAB2Q13303 367 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF177Q13360 481 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CST6Q15828 149 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 C11orf91Q3C1V1 193 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 BMP2KLQ5H9B9 411 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FHL5Q5TD97 284 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MBLAC2Q68D91 279 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 GUSBP11Q6P575 273 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 BORAQ6PGQ7 559 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 IGF2-ASQ6U949 168 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 USP30Q70CQ3 517 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CLEC14AQ86T13 490 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ACOT1Q86TX2 421 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FAM35AQ86V20 835 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ZFAND4Q86XD8 727 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 BRSK2Q8IWQ3 736 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FBXO39Q8N4B4 442 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 OR5B17Q8NGF7 314 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 RASSF8Q8NHQ8 419 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 CXorf38Q8TB03 319 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 HTR3CQ8WXA8 447 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 UBXN4Q92575 508 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 RNF34Q969K3 372 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ELMO3Q96BJ8 720 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MYO19Q96H55 970 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 MRGPRX2Q96LB1 330 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FAM129BQ96TA1 746 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 SMOQ99835 787 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 DCLK3Q9C098 648 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 RSPH9Q9H1X1 276 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FBXO44Q9H4M3 255 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FBRSQ9HAH7 460 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 NMUR1Q9HB89 426 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 DMAP1Q9NPF5 467 aaPredicted RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 KRT82Q9NSB4 513 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 DNAJC28Q9NX36 388 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FAM13BQ9NYF5 915 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ANAPC2Q9UJX6 822 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 GGA2Q9UJY4 613 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 AGO1Q9UL18 857 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ODF2LQ9ULJ1 636 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 SCML1Q9UN30 329 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF510Q9Y2H8 683 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 PCDHGA8Q9Y5G5 932 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ANKRD17O75179 2603 aaKnown RBP4.97□□□□□ -1.61
LIMS1-214ENST00000542845 ICE1Q9Y2F5 2266 aa4.97□□□□□ -1.61
LIMS1-214ENST00000542845 FLNCQ14315 2725 aa4.96□□□□□ -1.61
LIMS1-214ENST00000542845 BOD1L1Q8NFC6 3051 aa4.96□□□□□ -1.61
LIMS1-214ENST00000542845 BSNQ9UPA5 3926 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SLC12A8A0AV02 714 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 VWA3AA6NCI4 1184 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 NEMP2A6NFY4 417 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 TTC34A8MYJ7 566 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 K7ESM1 405 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PLD2O14939 933 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SLC31A1O15431 190 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 VPS4BO75351 444 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PIAS2O75928 621 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 IL1BP01584 269 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 NEFLP07196 543 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 GP1BAP07359 652 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DLDP09622 509 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms