RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ZNF549Q6P9A3 640 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 TMEM88Q6PEY1 159 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 LRIG3Q6UXM1 1119 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 ADPRHL1Q8NDY3 354 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 RSC1A1Q92681 617 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 SCLT1Q96NL6 688 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 ABHD14AQ9BUJ0 271 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 SFXN1Q9H9B4 322 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 FZD3Q9NPG1 666 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 NFU1Q9UMS0 254 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 CEP83Q9Y592 693 aa4□□□□□ -1.77
LEMD3-204ENST00000542032 LMTK3Q96Q04 1460 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 CNTNAP2Q9UHC6 1331 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 hCG_1642624A0A1W2PR95 340 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A18PA6NE21 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A16PA6NEW6 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A9PA6NNJ1 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A5PA8MXJ8 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 KCNJ18B7U540 433 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 ALDOAP04075 364 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A15PP0C7V4 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM90A14PP0C7W9 464 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 CHRNB1P11230 501 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 ALDH18A1P54886 795 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 GEMIN4P57678 1058 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 FAM3BP58499 235 aaPredicted RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 TAS2R50P59544 299 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 SHC2P98077 582 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 POU5F1Q01860 360 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 C6orf10Q5SRN2 563 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 RUSC1-AS1Q66K80 236 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 NUGGCQ68CJ6 796 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 MMS22LQ6ZRQ5 1243 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 MDGA2Q7Z553 956 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 NRSN1Q8IZ57 195 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 C1orf131Q8NDD1 294 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 WDR60Q8WVS4 1066 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 KAT2AQ92830 837 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 NPAS1Q99742 590 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 EIF2AK1Q9BQI3 630 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 WDR12Q9GZL7 423 aaKnown RBP3.99□□□□□ -1.77
LEMD3-204ENST00000542032 GPR52Q9Y2T5 361 aa3.99□□□□□ -1.77
LEMD3-204ENST00000542032 DYTNA2CJ06 578 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 GOLGA6L3A6NEY3 463 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 FOXO6A8MYZ6 492 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 RHODO00212 210 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TCERG1O14776 1098 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 MDM4O15151 490 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TIMM44O43615 452 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 ZC3H11AO75152 810 aaKnown RBP eCLIP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 SYF2O95926 243 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 ALDOCP09972 364 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TNFAIP3P21580 790 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 ARRB2P32121 409 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 COPB2P35606 906 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 CHKAP35790 457 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 CDK7P50613 346 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 PGGT1BP53609 377 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 ADPRHP54922 357 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 P2RX3P56373 397 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 RBM6P78332 1123 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 BTKQ06187 659 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 BIRC3Q13489 604 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 SEMA3AQ14563 771 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TTC39AQ5SRH9 613 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 UBAP2Q5T6F2 1119 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 RINT1Q6NUQ1 792 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TRAPPC11Q7Z392 1133 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 SYTL1Q8IYJ3 562 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 TMEM41AQ96HV5 264 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 REXO5Q96IC2 774 aaKnown RBP3.98□□□□□ -1.77
LEMD3-204ENST00000542032 MPP4Q96JB8 637 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 HTATIP2Q9BUP3 242 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 MAP6D1Q9H9H5 199 aa3.98□□□□□ -1.77
LEMD3-204ENST00000542032 SERINC4A6NH21 518 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 SLC38A8A6NNN8 435 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 DNPH1O43598 174 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 ASNA1O43681 348 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 NEURL1O76050 574 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 KCTD2Q14681 263 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 PTGR1Q14914 329 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 CCDC184Q52MB2 194 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 ANKRD40Q6AI12 368 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 B4GALNT4Q76KP1 1039 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 ACRBPQ8NEB7 543 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 FAM71BQ8TC56 605 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 TMEM174Q8WUU8 243 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 ASB5Q8WWX0 329 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 INPP5DQ92835 1189 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 MUL1Q969V5 352 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 EID2BQ96D98 161 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 PRPF18Q99633 342 aaKnown RBP3.97□□□□□ -1.77
LEMD3-204ENST00000542032 MECRQ9BV79 373 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 TASP1Q9H6P5 420 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 AAMDCQ9H7C9 122 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.97□□□□□ -1.77
LEMD3-204ENST00000542032 CDC23Q9UJX2 597 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 RAB21Q9UL25 225 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 TRPC5Q9UL62 973 aaPredicted RBP3.97□□□□□ -1.77
LEMD3-204ENST00000542032 SLC12A4Q9UP95 1085 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms