RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PMS2P54278 862 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 ERVK-21P61565 698 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 SARNPP82979 210 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 SATB1Q01826 763 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 PRKD1Q15139 912 aaPredicted RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 PPM1LQ5SGD2 360 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 ARMC3Q5W041 872 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 RAP1GAP2Q684P5 730 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 CPT1BQ92523 772 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 PLD4Q96BZ4 506 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 RNF38Q9H0F5 515 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 LRRC4CQ9HCJ2 640 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 TRPC7Q9HCX4 862 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 MPP6Q9NZW5 540 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 PLAAQ9Y263 795 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 YBX2Q9Y2T7 364 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 ANAPC1Q9H1A4 1944 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 BASP1P80723 227 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 GPM6BQ13491 265 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 SLMAPQ14BN4 828 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 QPCTQ16769 361 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 FAM133BQ5BKY9 247 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 FBXL22Q6P050 247 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 CYB5D1Q6P9G0 228 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 TBC1D1Q86TI0 1168 aaPredicted RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 CHSY1Q86X52 802 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 PARP9Q8IXQ6 854 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 RTL3Q8N8U3 475 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 CCDC110Q8TBZ0 833 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 SPDL1Q96EA4 605 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 CELF6Q96J87 481 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 BRD8Q9H0E9 1235 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 KIF9Q9HAQ2 790 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 SHOC2Q9UQ13 582 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 FARP1Q9Y4F1 1045 aaPredicted RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 MYO9BQ13459 2157 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 MTCL1Q9Y4B5 1905 aaKnown RBP8.91□□□□□ -0.98
THBS3-210ENST00000541576 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 C5orf60A6NFR6 353 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 H3BNC9 293 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 CCL16O15467 120 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 SHOX2O60902 331 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 GCATO75600 419 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 ZNF189O75820 626 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 MBL2P11226 248 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 PBX2P40425 430 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 SLC11A2P49281 568 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 CCNHP51946 323 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 GALNT2Q10471 571 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 PPIL6Q8IXY8 311 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 ZNF683Q8IZ20 524 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 ZCCHC9Q8N567 271 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 MDM1Q8TC05 714 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 SLC22A17Q8WUG5 538 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 MRPS31Q92665 395 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 PRCCQ92733 491 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 P2RY11Q96G91 374 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 PRMT1Q99873 361 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 KLC2Q9H0B6 622 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 PABPC3Q9H361 631 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 MAN1C1Q9NR34 630 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 ASAH2Q9NR71 780 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 GKN1Q9NS71 199 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 PPARGC1AQ9UBK2 798 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 MYO18AQ92614 2054 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 CLUHO75153 1309 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 GOLGA8MH3BSY2 632 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 ACSL4O60488 711 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 RHOQP17081 205 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 GARSP41250 739 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 PPIDQ08752 370 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 TXNDC8Q6A555 127 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 NADSYN1Q6IA69 706 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 PDE12Q6L8Q7 609 aaKnown RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 C4orf22Q6V702 233 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 GAREM2Q75VX8 874 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 RTL10Q7L3V2 364 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 TMC8Q8IU68 726 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 NAT8LQ8N9F0 302 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 HDAC11Q96DB2 347 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 RPRD1AQ96P16 312 aaPredicted RBP8.9□□□□□ -0.98
THBS3-210ENST00000541576 GCNAQ96QF7 691 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 LRRC3Q9BY71 257 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 FOXP3Q9BZS1 431 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 RAB6BQ9NRW1 208 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 SEPT10Q9P0V9 454 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 STK38LQ9Y2H1 464 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 CDH23Q9H251 3354 aa8.9□□□□□ -0.98
THBS3-210ENST00000541576 IGLV3-10A0A075B6K4 115 aa8.9□□□□□ -0.99
THBS3-210ENST00000541576 A0A0A0MRY4 1105 aa8.9□□□□□ -0.99
THBS3-210ENST00000541576 EME2A4GXA9 379 aaPredicted RBP8.9□□□□□ -0.99
THBS3-210ENST00000541576 WASH4PA8MWX3 477 aa8.9□□□□□ -0.99
THBS3-210ENST00000541576 F5H5T6 163 aa8.9□□□□□ -0.99
THBS3-210ENST00000541576 RNF103O00237 685 aa8.9□□□□□ -0.99
THBS3-210ENST00000541576 DFFAO00273 331 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms