RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 STMN2Q93045 179 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 E2F7Q96AV8 911 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 UROC1Q96N76 676 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 SLC2A13Q96QE2 648 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 DHX35Q9H5Z1 703 aaKnown RBP17.61■□□□□ 0.41
SPIDR-227ENST00000541342 SPATS2LQ9NUQ6 558 aaKnown RBP17.61■□□□□ 0.41
SPIDR-227ENST00000541342 EOMESO95936 686 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 AQP5P55064 265 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 FAM189BP81408 668 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 GPNMBQ14956 572 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 INTS6LQ5JSJ4 861 aaKnown RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 UNC5AQ6ZN44 842 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 NPY6RQ99463 290 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 IQCGQ9H095 443 aaKnown RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 TMPRSS4Q9NRS4 437 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 PPARGC1AQ9UBK2 798 aaKnown RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 YJEFN3A6XGL0 299 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 KRT37O76014 449 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 GSRP00390 522 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 MAGEA3P43357 314 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 MAGEA6P43360 314 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 KDSRQ06136 332 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 DCLRE1AQ6PJP8 1040 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 SMARCD1Q96GM5 515 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF184Q99676 751 aaPredicted RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 EBF4Q9BQW3 602 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 CSNK1G1Q9HCP0 422 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 MKS1Q9NXB0 559 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 SLC7A8Q9UHI5 535 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 APOL1O14791 398 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 AHCYL1O43865 530 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 APRTP07741 180 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 CYP2F1P24903 491 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 NOS2P35228 1153 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 CDK7P50613 346 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 DAOAP59103 153 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 RIPOR1Q6ZS17 1223 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 BHLHA9Q7RTU4 235 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 ULK2Q8IYT8 1036 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 MPP5Q8N3R9 675 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 SUSD3Q96L08 255 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 PAK5Q9P286 719 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 HBS1LQ9Y450 684 aaKnown RBP17.6■□□□□ 0.41
SPIDR-227ENST00000541342 HEY1Q9Y5J3 304 aa17.6■□□□□ 0.41
SPIDR-227ENST00000541342 MKI67P46013 3256 aaKnown RBP17.59■□□□□ 0.41
SPIDR-227ENST00000541342 USP17L7P0C7H9 530 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 GLB1LQ6UWU2 654 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 ZCCHC23Q6ZST2 131 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 METTL23Q86XA0 190 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 CCDC110Q8TBZ0 833 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 NRDE2Q9H7Z3 1164 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 ETNK2Q9NVF9 386 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 FZD10Q9ULW2 581 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 F8W8V4 182 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 NBNO60934 754 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 TM7SF2O76062 418 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 APOEP02649 317 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 TGM2P21980 687 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 BDNFP23560 247 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 DSC1Q08554 894 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF778Q96MU6 729 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 TSC22D3Q99576 134 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 UNC93B1Q9H1C4 597 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 PCMTD2Q9NV79 361 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 TRIM17Q9Y577 477 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 SYNJ2BP-COX16A0A087WUM0 186 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 PRR5-ARHGAP8B1AHC4 643 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF487B1APH4 448 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 SMIM24O75264 130 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 BCAR1P56945 870 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 ARHGAP8P85298 464 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 UBAP2LQ14157 1087 aaKnown RBP17.59■□□□□ 0.41
SPIDR-227ENST00000541342 OVOS1Q6IE37 1185 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 MYLK4Q86YV6 388 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-227ENST00000541342 SCUBE1Q8IWY4 988 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 COX16Q9P0S2 106 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 USP3Q9Y6I4 520 aa17.59■□□□□ 0.41
SPIDR-227ENST00000541342 TET1Q8NFU7 2136 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 MYCP01106 439 aaPredicted RBP17.58■□□□□ 0.41
SPIDR-227ENST00000541342 CPOXP36551 454 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 ACTR3P61158 418 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 NET1Q7Z628 596 aaPredicted RBP17.58■□□□□ 0.41
SPIDR-227ENST00000541342 FAM126BQ8IXS8 530 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 CSPG4P5Q96PW8 444 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 PIGVQ9NUD9 493 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 TAGLN3Q9UI15 199 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 DSEQ9UL01 958 aa17.58■□□□□ 0.41
SPIDR-227ENST00000541342 M0QYT0 321 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
SPIDR-227ENST00000541342 FBXO21O94952 628 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 ANPEPP15144 967 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 ALDH18A1P54886 795 aaKnown RBP17.58■□□□□ 0.4
SPIDR-227ENST00000541342 SLC10A2Q12908 348 aaPredicted RBP17.58■□□□□ 0.4
SPIDR-227ENST00000541342 NOMO2Q5JPE7 1267 aa17.58■□□□□ 0.4
SPIDR-227ENST00000541342 MROH9Q5TGP6 573 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms