RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 KLHL32Q96NJ5 620 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 QKIQ96PU8 341 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PKP2Q99959 881 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 GATA5Q9BWX5 397 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PRDM12Q9H4Q4 367 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 HSFX1Q9UBD0 423 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 ANKRD12Q6UB98 2062 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 A0A096LPK6 155 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 G3V2L1 256 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 CLDN5O00501 218 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 MAGEB3O15480 346 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PABPC4LP0CB38 370 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 MAGEA6P43360 314 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 SERPINB9P50453 376 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 TNFAIP1Q13829 316 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 LSM12Q3MHD2 195 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 KLHDC10Q6PID8 442 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PID1Q7Z2X4 250 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PQLC1Q8N2U9 271 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMIGD2Q96BF3 282 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 HIC2Q96JB3 615 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF670Q9BS34 389 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PCDHAC1Q9H158 963 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 CHRAC1Q9NRG0 131 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 ARHGAP26Q9UNA1 814 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 AP4B1Q9Y6B7 739 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 A0A0A0MRY4 1105 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ABCD1P33897 745 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 FLOT2Q14254 428 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 AAGABQ6PD74 315 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 KDELC2Q7Z4H8 507 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 DSELQ8IZU8 1212 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 PCDH20Q8N6Y1 951 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 RNF169Q8NCN4 708 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZFP28Q8NHY6 868 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TRPM4Q8TD43 1214 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CMTM5Q96DZ9 223 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CERS2Q96G23 380 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SPATA13Q96N96 652 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CDH19Q9H159 772 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TCF7L2Q9NQB0 619 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 KLK14Q9P0G3 267 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SRGAP2BP0DMP2 458 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TPSB2P20231 275 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 NAGLUP54802 743 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 RALGDSQ12967 914 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TPSAB1Q15661 275 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 LRRC23Q53EV4 343 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 DCAF6Q58WW2 860 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 APLFQ8IW19 511 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CPNE9Q8IYJ1 553 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 DNAAF3Q8N9W5 541 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC35F5Q8WV83 523 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 NCSTNQ92542 709 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC45A3Q96JT2 553 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ANLNQ9NQW6 1124 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZDHHC7Q9NXF8 308 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 LMCD1Q9NZU5 365 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 NEMP2A6NFY4 417 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 H3BSA7 217 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SOCS7O14512 581 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CLPTM1O96005 669 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 C2P06681 752 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 P4HA1P13674 534 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 INSRRP14616 1297 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ACAT1P24752 427 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 SOX11P35716 441 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 GRM2Q14416 872 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TBCCQ15814 346 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 DPYSL2Q16555 572 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 PITRM1Q5JRX3 1037 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 LAYNQ6UX15 382 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 TIFABQ6ZNK6 161 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 HFE2Q6ZVN8 426 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZBTB46Q86UZ6 589 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 CDKL2Q92772 493 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 LRRC39Q96DD0 335 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 PRICKLE1Q96MT3 831 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 IARS2Q9NSE4 1012 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 GNEQ9Y223 722 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-207ENST00000540998 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 I6L893 689 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 FOXD2O60548 495 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 BEST1O76090 585 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 PIGNO95427 931 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 AKAP5P24588 427 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 TKTP29401 623 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 ARL13AQ5H913 290 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 OGFRL1Q5TC84 451 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 SYPL2Q5VXT5 272 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms