RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CTSOP43234 321 aaPredicted RBP27.7■■■□□ 2.02
CHFR-218ENST00000540963 CLDN6P56747 220 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 KRT85P78386 507 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 BNIP3Q12983 259 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 COBLL1Q53SF7 1204 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 STK40Q8N2I9 435 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 DQX1Q8TE96 717 aaKnown RBP27.7■■■□□ 2.02
CHFR-218ENST00000540963 TRIM62Q9BVG3 475 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 CEP83Q9Y592 693 aa27.7■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3DA0A087WVF3 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3IA0A087WXS9 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3EA0A087X179 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3KA0A087X1G2 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 A0A1W2PQ27 194 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 A0A1W2PQ64 194 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3FA6NER0 549 aaPredicted RBP27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3LB9A6J9 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 M0QYV0 167 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 CAPN9O14815 690 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 FYNP06241 537 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3HP0C7X1 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 ACTN2P35609 894 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 SULT2A1Q06520 285 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3GQ6DHY5 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3CQ6IPX1 549 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 MMS22LQ6ZRQ5 1243 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 GPR155Q7Z3F1 870 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D3Q8IZP1 549 aaPredicted RBP27.69■■■□□ 2.02
CHFR-218ENST00000540963 DCBLD1Q8N8Z6 715 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 CLEC4CQ8WTT0 213 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 SLC35C1Q96A29 364 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 SPAG5Q96R06 1193 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 TSG101Q99816 390 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 ARHGAP20Q9P2F6 1191 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 CLCA2Q9UQC9 943 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 RAI2Q9Y5P3 530 aa27.69■■■□□ 2.02
CHFR-218ENST00000540963 PMM2O15305 246 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 IL1BP01584 269 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 GLDCP23378 1020 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 DRD3P35462 400 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 RPL34P49207 117 aaKnown RBP27.68■■■□□ 2.02
CHFR-218ENST00000540963 VASPP50552 380 aaPredicted RBP27.68■■■□□ 2.02
CHFR-218ENST00000540963 E2F1Q01094 437 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 DSG4Q86SJ6 1040 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 SPATS2Q86XZ4 545 aaKnown RBP27.68■■■□□ 2.02
CHFR-218ENST00000540963 CFAP52Q8N1V2 620 aa27.68■■■□□ 2.02
CHFR-218ENST00000540963 ARMCX3Q9UH62 379 aaPredicted RBP27.68■■■□□ 2.02
CHFR-218ENST00000540963 CAPN8A6NHC0 703 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PIK3R2O00459 728 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PPP2CBP62714 309 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PPP2CAP67775 309 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PROX2Q3B8N5 592 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 TRIM69Q86WT6 500 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 SMYD4Q8IYR2 804 aaPredicted RBP27.67■■■□□ 2.02
CHFR-218ENST00000540963 APCDD1Q8J025 514 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 RPL10LQ96L21 214 aaKnown RBP27.67■■■□□ 2.02
CHFR-218ENST00000540963 ZSWIM1Q9BR11 485 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 RMND1Q9NWS8 449 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 TJP2Q9UDY2 1190 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 CYTH4Q9UIA0 394 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PCDHB4Q9Y5E5 795 aa27.67■■■□□ 2.02
CHFR-218ENST00000540963 PLRG1O43660 514 aaKnown RBP27.66■■■□□ 2.02
CHFR-218ENST00000540963 BRINP1O60477 761 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 ZNF202O95125 648 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 APOEP02649 317 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 PRCPP42785 496 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 PLK1P53350 603 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 OXCT1P55809 520 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 LRMPQ12912 555 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 TBC1D25Q3MII6 688 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 FAM46CQ5VWP2 391 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.66■■■□□ 2.02
CHFR-218ENST00000540963 LGI2Q8N0V4 545 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 BTN2A3PQ96KV6 586 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 NT5C1BQ96P26 610 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 MIS12Q9H081 205 aa27.66■■■□□ 2.02
CHFR-218ENST00000540963 DOCK9Q9BZ29 2069 aa27.65■■■□□ 2.02
CHFR-218ENST00000540963 INSM1Q01101 510 aaPredicted RBP27.65■■■□□ 2.02
CHFR-218ENST00000540963 ZNF211Q13398 564 aaPredicted RBP27.65■■■□□ 2.02
CHFR-218ENST00000540963 STAT4Q14765 748 aa27.65■■■□□ 2.02
CHFR-218ENST00000540963 COL26A1Q96A83 441 aa27.65■■■□□ 2.02
CHFR-218ENST00000540963 PPP1R9BQ96SB3 815 aa27.65■■■□□ 2.02
CHFR-218ENST00000540963 METTL14Q9HCE5 456 aaKnown RBP27.65■■■□□ 2.02
CHFR-218ENST00000540963 NAALADL1Q9UQQ1 740 aa27.65■■■□□ 2.02
CHFR-218ENST00000540963 RNF225M0QZC1 329 aaPredicted RBP27.64■■■□□ 2.02
CHFR-218ENST00000540963 RNGTTO60942 597 aaKnown RBP27.64■■■□□ 2.02
CHFR-218ENST00000540963 ACADSBP45954 432 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 NUCB2P80303 420 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 TLE3Q04726 772 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 LRRC63Q05C16 580 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 TTC39BQ5VTQ0 682 aaPredicted RBP27.64■■■□□ 2.02
CHFR-218ENST00000540963 FRS2Q8WU20 508 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 FAM149B1Q96BN6 582 aa27.64■■■□□ 2.02
CHFR-218ENST00000540963 SCAND2PQ9GZW5 306 aaPredicted RBP27.64■■■□□ 2.02
CHFR-218ENST00000540963 PRAMEF26H0Y7S4 382 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 ZIC2O95409 532 aaPredicted RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 MOCS2O96007 188 aaPredicted RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 TACR2P21452 398 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 BRD2P25440 801 aaKnown RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 FMO5P49326 533 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms