RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MAPK10P53779 464 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SP2Q02086 613 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ZNF252P-AS1Q0IIN9 211 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CNGA3Q16281 694 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CARTPTQ16568 116 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DCAF6Q58WW2 860 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 OGFRL1Q5TC84 451 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 TXNRD3NBQ6F5E7 133 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PRR23BQ6ZRT6 265 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DENND5BQ6ZUT9 1274 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SNX29P2Q8IUI4 249 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 IGDCC3Q8IVU1 814 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ALDH16A1Q8IZ83 802 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DIS3LQ8TF46 1054 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 APBB2Q92870 758 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 FAM84AQ96KN4 292 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 AGAP3Q96P47 875 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 NDEL1Q9GZM8 345 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 STN1Q9H668 368 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 PXMP2Q9NR77 195 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 MKS1Q9NXB0 559 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 AFF4Q9UHB7 1163 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 APOBEC2Q9Y235 224 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 POMPQ9Y244 141 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ANK1P16157 1881 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PDHXO00330 501 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CYB561D2O14569 222 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DENRO43583 198 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 CST8O60676 142 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TOM1L1O75674 476 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 FAM155BO75949 473 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ENDOD1O94919 500 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 BPGMP07738 259 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 NAT2P11245 290 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CD1EP15812 388 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ORC1Q13415 861 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PIGHQ14442 188 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 TLR1Q15399 786 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TCHHL1Q5QJ38 904 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 RARS2Q5T160 578 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 SPOPLQ6IQ16 392 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PGM2L1Q6PCE3 622 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ARCQ7LC44 396 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DDX53Q86TM3 631 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 CACUL1Q86Y37 369 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DEFB107AQ8IZN7 70 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TMEM161BQ8NDZ6 487 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CDKL2Q92772 493 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 FBXL18Q96ME1 805 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 RBM38Q9H0Z9 239 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 C2orf40Q9H1Z8 148 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 EPS8L2Q9H6S3 715 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 STARD7Q9NQZ5 370 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 THAP1Q9NVV9 213 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ABI2Q9NYB9 513 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 ERAP1Q9NZ08 941 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 KIAA1522Q9P206 1035 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 SAE1Q9UBE0 346 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 RAB26Q9ULW5 256 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PSMD13Q9UNM6 376 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 RABL2BQ9UNT1 228 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 WDR37Q9Y2I8 494 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 MKI67P46013 3256 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 CROCCQ5TZA2 2017 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 BIRC5O15392 142 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CNMDO75829 334 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 DGAT1O75907 488 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 KRT38O76015 456 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 LYPLA2O95372 231 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 VTNP04004 478 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 KCNA2P16389 499 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ALDH7A1P49419 539 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 MRPS5P82675 430 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 CNTN2Q02246 1040 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CUL2Q13617 745 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 BMPR2Q13873 1038 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 PRAMEF19Q5SWL8 479 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 METTL21CQ5VZV1 264 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CES4AQ5XG92 561 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ITPRIPL1Q6GPH6 555 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CATSPERGQ6ZRH7 1159 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ZCCHC23Q6ZST2 131 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 BBS12Q6ZW61 710 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CCDC80Q76M96 950 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 GET4Q7L5D6 327 aaPredicted RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 VASH1Q7L8A9 365 aaPredicted RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 PLEKHH3Q7Z736 793 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 UNC45BQ8IWX7 931 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 NUP93Q8N1F7 819 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 LRRC43Q8N309 656 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 CATSPER1Q8NEC5 780 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 KCNK16Q96T55 309 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 YME1L1Q96TA2 773 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 MRPL1Q9BYD6 325 aaKnown RBP5.34□□□□□ -1.55
PROM1-220ENST00000540805 FAM96AQ9H5X1 160 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 ZNF696Q9H7X3 374 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
PROM1-220ENST00000540805 IFT122Q9HBG6 1241 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms